RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 RGS17Q9UGC6 210 aaPredicted RBP25.01■■□□□ 1.59
CCS-201ENST00000310190 CD163L1Q9NR16 1453 aa25.01■■□□□ 1.59
CCS-201ENST00000310190 MON2Q7Z3U7 1717 aa25■■□□□ 1.59
CCS-201ENST00000310190 NRKQ7Z2Y5 1582 aa24.97■■□□□ 1.59
CCS-201ENST00000310190 FNBP4Q8N3X1 1017 aaPredicted RBP24.96■■□□□ 1.59
CCS-201ENST00000310190 NUTM2BA6NNL0 878 aaPredicted RBP24.95■■□□□ 1.58
CCS-201ENST00000310190 NUTM2EB1AL46 878 aaPredicted RBP24.95■■□□□ 1.58
CCS-201ENST00000310190 NUTM2AQ8IVF1 878 aaPredicted RBP24.95■■□□□ 1.58
CCS-201ENST00000310190 USP19O94966 1318 aa24.94■■□□□ 1.58
CCS-201ENST00000310190 TTC21AQ8NDW8 1320 aa24.94■■□□□ 1.58
CCS-201ENST00000310190 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
CCS-201ENST00000310190 HSPA5P11021 654 aaKnown RBP24.93■■□□□ 1.58
CCS-201ENST00000310190 ZNF772Q68DY9 489 aaPredicted RBP24.93■■□□□ 1.58
CCS-201ENST00000310190 USP54Q70EL1 1684 aa24.93■■□□□ 1.58
CCS-201ENST00000310190 MEX3CQ5U5Q3 659 aaKnown RBP24.92■■□□□ 1.58
CCS-201ENST00000310190 SLC12A5Q9H2X9 1139 aa24.92■■□□□ 1.58
CCS-201ENST00000310190 TERF2IPQ9NYB0 399 aa24.92■■□□□ 1.58
CCS-201ENST00000310190 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
CCS-201ENST00000310190 KTN1Q86UP2 1357 aaKnown RBP24.91■■□□□ 1.58
CCS-201ENST00000310190 PHRF1Q9P1Y6 1649 aaKnown RBP24.9■■□□□ 1.58
CCS-201ENST00000310190 TTC21BQ7Z4L5 1316 aa24.9■■□□□ 1.58
CCS-201ENST00000310190 EDC4Q6P2E9 1401 aaKnown RBP24.9■■□□□ 1.58
CCS-201ENST00000310190 PIK3C2AO00443 1686 aa24.9■■□□□ 1.58
CCS-201ENST00000310190 SLIT2O94813 1529 aa24.9■■□□□ 1.58
CCS-201ENST00000310190 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.58
CCS-201ENST00000310190 ABTB2Q8N961 1025 aa24.89■■□□□ 1.58
CCS-201ENST00000310190 ANKRD36BQ8N2N9 1353 aa24.89■■□□□ 1.57
CCS-201ENST00000310190 AFF2P51816 1311 aa24.88■■□□□ 1.57
CCS-201ENST00000310190 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
CCS-201ENST00000310190 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
CCS-201ENST00000310190 NWD2Q9ULI1 1742 aa24.88■■□□□ 1.57
CCS-201ENST00000310190 A0A1W2PP64 1363 aa24.88■■□□□ 1.57
CCS-201ENST00000310190 USP31Q70CQ4 1352 aa24.88■■□□□ 1.57
CCS-201ENST00000310190 SLIT3O75094 1523 aa24.87■■□□□ 1.57
CCS-201ENST00000310190 ADAMTS2O95450 1211 aa24.87■■□□□ 1.57
CCS-201ENST00000310190 LMOD2Q6P5Q4 547 aa24.87■■□□□ 1.57
CCS-201ENST00000310190 MYOM1P52179 1685 aa24.87■■□□□ 1.57
CCS-201ENST00000310190 CPDO75976 1380 aa24.86■■□□□ 1.57
CCS-201ENST00000310190 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
CCS-201ENST00000310190 NGLY1Q96IV0 654 aa24.86■■□□□ 1.57
CCS-201ENST00000310190 BCL9LQ86UU0 1499 aa24.85■■□□□ 1.57
CCS-201ENST00000310190 POTEAQ6S8J7 498 aa24.85■■□□□ 1.57
CCS-201ENST00000310190 TMC1Q8TDI8 760 aa24.85■■□□□ 1.57
CCS-201ENST00000310190 C8orf37Q96NL8 207 aa24.85■■□□□ 1.57
CCS-201ENST00000310190 COL14A1Q05707 1796 aaKnown RBP24.84■■□□□ 1.57
CCS-201ENST00000310190 ATRNO75882 1429 aa24.8■■□□□ 1.56
CCS-201ENST00000310190 GCP02774 474 aa24.8■■□□□ 1.56
CCS-201ENST00000310190 NLRP6P59044 892 aa24.8■■□□□ 1.56
CCS-201ENST00000310190 CDK12Q9NYV4 1490 aaPredicted RBP24.8■■□□□ 1.56
CCS-201ENST00000310190 PLCH1Q4KWH8 1693 aa24.8■■□□□ 1.56
CCS-201ENST00000310190 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
CCS-201ENST00000310190 HAP1P54257 671 aaPredicted RBP24.79■■□□□ 1.56
CCS-201ENST00000310190 USP21Q9UK80 565 aa24.78■■□□□ 1.56
CCS-201ENST00000310190 UNC5CLQ8IV45 518 aa24.77■■□□□ 1.56
CCS-201ENST00000310190 NRAPQ86VF7 1730 aa24.76■■□□□ 1.55
CCS-201ENST00000310190 KCNH5Q8NCM2 988 aa24.76■■□□□ 1.55
CCS-201ENST00000310190 TRPC5Q9UL62 973 aaPredicted RBP24.76■■□□□ 1.55
CCS-201ENST00000310190 OVOS2A0A0J9YW53 1432 aa24.76■■□□□ 1.55
CCS-201ENST00000310190 OVOS2Q6IE36 1432 aa24.76■■□□□ 1.55
CCS-201ENST00000310190 LMO7Q8WWI1 1683 aa24.75■■□□□ 1.55
CCS-201ENST00000310190 NUTM2GQ5VZR2 741 aa24.75■■□□□ 1.55
CCS-201ENST00000310190 QTRT2Q9H974 415 aaKnown RBP24.75■■□□□ 1.55
CCS-201ENST00000310190 KIAA0232Q92628 1395 aa24.75■■□□□ 1.55
CCS-201ENST00000310190 ABCC6O95255 1503 aa24.75■■□□□ 1.55
CCS-201ENST00000310190 NFAT5O94916 1531 aa24.74■■□□□ 1.55
CCS-201ENST00000310190 C11orf95C9JLR9 678 aaPredicted RBP24.73■■□□□ 1.55
CCS-201ENST00000310190 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
CCS-201ENST00000310190 AATKQ6ZMQ8 1374 aa24.72■■□□□ 1.55
CCS-201ENST00000310190 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
CCS-201ENST00000310190 RXRBP28702 533 aa24.71■■□□□ 1.55
CCS-201ENST00000310190 VPS72Q15906 364 aa24.71■■□□□ 1.55
CCS-201ENST00000310190 COL18A1P39060 1754 aa24.71■■□□□ 1.55
CCS-201ENST00000310190 NME9Q86XW9 330 aa24.7■■□□□ 1.54
CCS-201ENST00000310190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.54
CCS-201ENST00000310190 CARD14Q9BXL6 1004 aa24.7■■□□□ 1.54
CCS-201ENST00000310190 ARHGEF25Q86VW2 580 aa24.69■■□□□ 1.54
CCS-201ENST00000310190 KIF7Q2M1P5 1343 aa24.67■■□□□ 1.54
CCS-201ENST00000310190 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
CCS-201ENST00000310190 FYB1O15117 783 aa24.67■■□□□ 1.54
CCS-201ENST00000310190 ZC3H6P61129 1189 aaKnown RBP24.67■■□□□ 1.54
CCS-201ENST00000310190 GJD4Q96KN9 370 aaPredicted RBP24.67■■□□□ 1.54
CCS-201ENST00000310190 BTG4Q9NY30 223 aa24.67■■□□□ 1.54
CCS-201ENST00000310190 ONECUT3O60422 494 aaPredicted RBP24.66■■□□□ 1.54
CCS-201ENST00000310190 KIF20BQ96Q89 1820 aa24.65■■□□□ 1.54
CCS-201ENST00000310190 GLI3P10071 1580 aa24.65■■□□□ 1.54
CCS-201ENST00000310190 ZRANB1Q9UGI0 708 aa24.65■■□□□ 1.54
CCS-201ENST00000310190 NSD3Q9BZ95 1437 aa24.63■■□□□ 1.53
CCS-201ENST00000310190 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
CCS-201ENST00000310190 COG3Q96JB2 828 aa24.63■■□□□ 1.53
CCS-201ENST00000310190 PLEKHG5O94827 1062 aa24.62■■□□□ 1.53
CCS-201ENST00000310190 CHRNA2Q15822 529 aa24.61■■□□□ 1.53
CCS-201ENST00000310190 CCDC7Q96M83 1385 aa24.61■■□□□ 1.53
CCS-201ENST00000310190 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
CCS-201ENST00000310190 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
CCS-201ENST00000310190 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
CCS-201ENST00000310190 COL5A2P05997 1499 aaPredicted RBP24.6■■□□□ 1.53
CCS-201ENST00000310190 PANK3Q9H999 370 aa24.59■■□□□ 1.53
CCS-201ENST00000310190 LTN1O94822 1766 aa24.59■■□□□ 1.53
CCS-201ENST00000310190 RGS12O14924 1447 aa24.59■■□□□ 1.53
CCS-201ENST00000310190 NSD2O96028 1365 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms