RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
CTDSPL-202ENST00000310189 FYB1O15117 783 aa15.18■□□□□ 0.02
CTDSPL-202ENST00000310189 NGDNQ8NEJ9 315 aaKnown RBP15.18■□□□□ 0.02
CTDSPL-202ENST00000310189 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
CTDSPL-202ENST00000310189 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
CTDSPL-202ENST00000310189 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
CTDSPL-202ENST00000310189 ACEP12821 1306 aa15.16■□□□□ 0.02
CTDSPL-202ENST00000310189 COG3Q96JB2 828 aa15.16■□□□□ 0.02
CTDSPL-202ENST00000310189 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
CTDSPL-202ENST00000310189 MST1RQ04912 1400 aa15.15■□□□□ 0.02
CTDSPL-202ENST00000310189 AKAP12Q02952 1782 aa15.15■□□□□ 0.02
CTDSPL-202ENST00000310189 MTHFSP49914 203 aa15.14■□□□□ 0.01
CTDSPL-202ENST00000310189 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
CTDSPL-202ENST00000310189 MON2Q7Z3U7 1717 aa15.14■□□□□ 0.01
CTDSPL-202ENST00000310189 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
CTDSPL-202ENST00000310189 ESCO1Q5FWF5 840 aa15.14■□□□□ 0.01
CTDSPL-202ENST00000310189 TTC21AQ8NDW8 1320 aa15.13■□□□□ 0.01
CTDSPL-202ENST00000310189 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
CTDSPL-202ENST00000310189 PMFBP1Q8TBY8 1022 aa15.12■□□□□ 0.01
CTDSPL-202ENST00000310189 ADAMTS8Q9UP79 889 aa15.12■□□□□ 0.01
CTDSPL-202ENST00000310189 PHF8Q9UPP1 1060 aa15.12■□□□□ 0.01
CTDSPL-202ENST00000310189 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
CTDSPL-202ENST00000310189 USP6P35125 1406 aa15.1■□□□□ 0.01
CTDSPL-202ENST00000310189 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
CTDSPL-202ENST00000310189 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
CTDSPL-202ENST00000310189 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 NME9Q86XW9 330 aa15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 PNNQ9H307 717 aaKnown RBP15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 RGPD8O14715 1765 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL-202ENST00000310189 NEFLP07196 543 aa15.08■□□□□ 0.01
CTDSPL-202ENST00000310189 PDE3BQ13370 1112 aa15.08■□□□□ 0.01
CTDSPL-202ENST00000310189 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0.01
CTDSPL-202ENST00000310189 KIF1AQ12756 1690 aa15.07■□□□□ 0
CTDSPL-202ENST00000310189 TOM1O60784 492 aa15.07■□□□□ 0
CTDSPL-202ENST00000310189 AATKQ6ZMQ8 1374 aa15.06■□□□□ 0
CTDSPL-202ENST00000310189 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
CTDSPL-202ENST00000310189 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
CTDSPL-202ENST00000310189 NEFMP07197 916 aa15.06■□□□□ 0
CTDSPL-202ENST00000310189 PSME1Q06323 249 aa15.06■□□□□ 0
CTDSPL-202ENST00000310189 BRINP3Q76B58 766 aa15.06■□□□□ 0
CTDSPL-202ENST00000310189 FOXO3O43524 673 aa15.05■□□□□ -0
CTDSPL-202ENST00000310189 POTEDQ86YR6 584 aa15.05■□□□□ -0
CTDSPL-202ENST00000310189 NRKQ7Z2Y5 1582 aa15.04■□□□□ -0
CTDSPL-202ENST00000310189 UBAP1LF5GYI3 381 aa15.04■□□□□ -0
CTDSPL-202ENST00000310189 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
CTDSPL-202ENST00000310189 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
CTDSPL-202ENST00000310189 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
CTDSPL-202ENST00000310189 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
CTDSPL-202ENST00000310189 U2SURPO15042 1029 aaKnown RBP15.03■□□□□ -0
CTDSPL-202ENST00000310189 RUNDC1Q96C34 613 aa15.03■□□□□ -0
CTDSPL-202ENST00000310189 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
CTDSPL-202ENST00000310189 POLKQ9UBT6 870 aa15.02■□□□□ -0
CTDSPL-202ENST00000310189 MAP2P11137 1827 aaKnown RBP15.02□□□□□ -0.01
CTDSPL-202ENST00000310189 NLRP6P59044 892 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 ABTB2Q8N961 1025 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
CTDSPL-202ENST00000310189 USP31Q70CQ4 1352 aa15□□□□□ -0.01
CTDSPL-202ENST00000310189 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
CTDSPL-202ENST00000310189 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
CTDSPL-202ENST00000310189 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
CTDSPL-202ENST00000310189 SHPRHQ149N8 1683 aa15□□□□□ -0.01
CTDSPL-202ENST00000310189 ROBO1Q9Y6N7 1651 aa15□□□□□ -0.01
CTDSPL-202ENST00000310189 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
CTDSPL-202ENST00000310189 APAF1O14727 1248 aa14.99□□□□□ -0.01
CTDSPL-202ENST00000310189 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
CTDSPL-202ENST00000310189 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
CTDSPL-202ENST00000310189 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
CTDSPL-202ENST00000310189 EMILIN1Q9Y6C2 1016 aa14.97□□□□□ -0.01
CTDSPL-202ENST00000310189 PXDNQ92626 1479 aa14.97□□□□□ -0.01
CTDSPL-202ENST00000310189 FCHSD2O94868 740 aa14.96□□□□□ -0.01
CTDSPL-202ENST00000310189 GOLGA2Q08379 1002 aa14.96□□□□□ -0.01
CTDSPL-202ENST00000310189 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
CTDSPL-202ENST00000310189 SBNO1A3KN83 1393 aa14.96□□□□□ -0.02
CTDSPL-202ENST00000310189 NHSL1Q5SYE7 1610 aa14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 AMPHP49418 695 aa14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 SOX12O15370 315 aa14.95□□□□□ -0.02
CTDSPL-202ENST00000310189 TNS3Q68CZ2 1445 aa14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 AHDC1Q5TGY3 1603 aaPredicted RBP14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 KIF24Q5T7B8 1368 aa14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 TRPM3Q9HCF6 1732 aaPredicted RBP14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 PIK3C2AO00443 1686 aa14.94□□□□□ -0.02
CTDSPL-202ENST00000310189 FBLN1P23142 703 aa14.93□□□□□ -0.02
CTDSPL-202ENST00000310189 NUTM2GQ5VZR2 741 aa14.93□□□□□ -0.02
CTDSPL-202ENST00000310189 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms