RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ATF3P18847 181 aa30.21■■■□□ 2.43
IRF3-201ENST00000309877 ZNF335Q9H4Z2 1342 aaPredicted RBP30.21■■■□□ 2.43
IRF3-201ENST00000309877 COG3Q96JB2 828 aa30.2■■■□□ 2.42
IRF3-201ENST00000309877 MTHFSP49914 203 aa30.19■■■□□ 2.42
IRF3-201ENST00000309877 WDR43Q15061 677 aaKnown RBP eCLIP30.18■■■□□ 2.42
IRF3-201ENST00000309877 TTC21AQ8NDW8 1320 aa30.17■■■□□ 2.42
IRF3-201ENST00000309877 NRKQ7Z2Y5 1582 aa30.17■■■□□ 2.42
IRF3-201ENST00000309877 CFAP53Q96M91 514 aa30.17■■■□□ 2.42
IRF3-201ENST00000309877 ZRANB1Q9UGI0 708 aa30.16■■■□□ 2.42
IRF3-201ENST00000309877 DCCP43146 1447 aa30.16■■■□□ 2.42
IRF3-201ENST00000309877 SSH2Q76I76 1423 aa30.16■■■□□ 2.42
IRF3-201ENST00000309877 MSH6P52701 1360 aa30.15■■■□□ 2.42
IRF3-201ENST00000309877 SCAF1Q9H7N4 1312 aaKnown RBP30.14■■■□□ 2.42
IRF3-201ENST00000309877 CADPS2Q86UW7 1296 aa30.14■■■□□ 2.41
IRF3-201ENST00000309877 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
IRF3-201ENST00000309877 ORAI2Q96SN7 254 aa30.12■■■□□ 2.41
IRF3-201ENST00000309877 C1orf167Q5SNV9 1468 aa30.12■■■□□ 2.41
IRF3-201ENST00000309877 PSME1Q06323 249 aa30.1■■■□□ 2.41
IRF3-201ENST00000309877 ADAMTS8Q9UP79 889 aa30.1■■■□□ 2.41
IRF3-201ENST00000309877 INSRP06213 1382 aa30.09■■■□□ 2.41
IRF3-201ENST00000309877 MST1RQ04912 1400 aa30.07■■■□□ 2.4
IRF3-201ENST00000309877 PAK3O75914 559 aaPredicted RBP30.07■■■□□ 2.4
IRF3-201ENST00000309877 AATKQ6ZMQ8 1374 aa30.05■■■□□ 2.4
IRF3-201ENST00000309877 OVOS2A0A0J9YW53 1432 aa30.05■■■□□ 2.4
IRF3-201ENST00000309877 OVOS2Q6IE36 1432 aa30.05■■■□□ 2.4
IRF3-201ENST00000309877 POLKQ9UBT6 870 aa30.04■■■□□ 2.4
IRF3-201ENST00000309877 ZBED9Q6R2W3 1325 aa30.04■■■□□ 2.4
IRF3-201ENST00000309877 FOXO3O43524 673 aa30.04■■■□□ 2.4
IRF3-201ENST00000309877 FBLN1P23142 703 aa30.04■■■□□ 2.4
IRF3-201ENST00000309877 USP31Q70CQ4 1352 aa30.03■■■□□ 2.4
IRF3-201ENST00000309877 XIRP1Q702N8 1843 aaKnown RBP30.03■■■□□ 2.4
IRF3-201ENST00000309877 BLMP54132 1417 aaPredicted RBP30.02■■■□□ 2.4
IRF3-201ENST00000309877 PPM1GO15355 546 aaPredicted RBP30.01■■■□□ 2.4
IRF3-201ENST00000309877 NLRP6P59044 892 aa30.01■■■□□ 2.4
IRF3-201ENST00000309877 ABTB2Q8N961 1025 aa30.01■■■□□ 2.4
IRF3-201ENST00000309877 KIF1AQ12756 1690 aa30.01■■■□□ 2.39
IRF3-201ENST00000309877 NUDCQ9Y266 331 aa29.99■■■□□ 2.39
IRF3-201ENST00000309877 EMILIN1Q9Y6C2 1016 aa29.98■■■□□ 2.39
IRF3-201ENST00000309877 PIK3C2AO00443 1686 aa29.97■■■□□ 2.39
IRF3-201ENST00000309877 PNPLA6Q8IY17 1366 aa29.97■■■□□ 2.39
IRF3-201ENST00000309877 RRS1Q15050 365 aaKnown RBP29.97■■■□□ 2.39
IRF3-201ENST00000309877 NUTM2GQ5VZR2 741 aa29.96■■■□□ 2.39
IRF3-201ENST00000309877 KRT28Q7Z3Y7 464 aa29.96■■■□□ 2.39
IRF3-201ENST00000309877 SENP3-EIF4A1A0A087X0R7 540 aa29.95■■■□□ 2.39
IRF3-201ENST00000309877 DIAPH1O60610 1272 aaKnown RBP29.95■■■□□ 2.39
IRF3-201ENST00000309877 XPCQ01831 940 aaPredicted RBP29.95■■■□□ 2.39
IRF3-201ENST00000309877 SHPRHQ149N8 1683 aa29.94■■■□□ 2.38
IRF3-201ENST00000309877 MAP2P11137 1827 aaKnown RBP29.94■■■□□ 2.38
IRF3-201ENST00000309877 SMG6Q86US8 1419 aaKnown RBP29.94■■■□□ 2.38
IRF3-201ENST00000309877 SOX12O15370 315 aa29.94■■■□□ 2.38
IRF3-201ENST00000309877 COL3A1P02461 1466 aaPredicted RBP29.93■■■□□ 2.38
IRF3-201ENST00000309877 U2AF1L5P0DN76 240 aaPredicted RBP29.91■■■□□ 2.38
IRF3-201ENST00000309877 U2AF1Q01081 240 aaKnown RBP eCLIP29.91■■■□□ 2.38
IRF3-201ENST00000309877 U2SURPO15042 1029 aaKnown RBP29.91■■■□□ 2.38
IRF3-201ENST00000309877 CCDC146Q8IYE0 955 aa29.91■■■□□ 2.38
IRF3-201ENST00000309877 SLAIN2Q9P270 581 aa29.91■■■□□ 2.38
IRF3-201ENST00000309877 CDK12Q9NYV4 1490 aaPredicted RBP29.91■■■□□ 2.38
IRF3-201ENST00000309877 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
IRF3-201ENST00000309877 SALL2Q9Y467 1007 aaPredicted RBP29.89■■■□□ 2.38
IRF3-201ENST00000309877 LMOD2Q6P5Q4 547 aa29.87■■■□□ 2.37
IRF3-201ENST00000309877 USP54Q70EL1 1684 aa29.86■■■□□ 2.37
IRF3-201ENST00000309877 BRINP3Q76B58 766 aa29.86■■■□□ 2.37
IRF3-201ENST00000309877 AEBP2Q6ZN18 517 aaPredicted RBP29.85■■■□□ 2.37
IRF3-201ENST00000309877 DDX17Q92841 729 aaKnown RBP29.84■■■□□ 2.37
IRF3-201ENST00000309877 RUNDC1Q96C34 613 aa29.84■■■□□ 2.37
IRF3-201ENST00000309877 MAP3K19Q56UN5 1328 aa29.83■■■□□ 2.37
IRF3-201ENST00000309877 TRPM3Q9HCF6 1732 aaPredicted RBP29.82■■■□□ 2.36
IRF3-201ENST00000309877 APAF1O14727 1248 aa29.82■■■□□ 2.36
IRF3-201ENST00000309877 IL13P35225 146 aa29.81■■■□□ 2.36
IRF3-201ENST00000309877 AMPHP49418 695 aa29.81■■■□□ 2.36
IRF3-201ENST00000309877 KCNH5Q8NCM2 988 aa29.81■■■□□ 2.36
IRF3-201ENST00000309877 MARF1Q9Y4F3 1742 aaKnown RBP29.81■■■□□ 2.36
IRF3-201ENST00000309877 SBNO1A3KN83 1393 aa29.81■■■□□ 2.36
IRF3-201ENST00000309877 PNNQ9H307 717 aaKnown RBP29.79■■■□□ 2.36
IRF3-201ENST00000309877 LTBP4Q8N2S1 1624 aa29.79■■■□□ 2.36
IRF3-201ENST00000309877 FLT4P35916 1363 aa29.78■■■□□ 2.36
IRF3-201ENST00000309877 HSP90AB2PQ58FF8 381 aa29.76■■■□□ 2.36
IRF3-201ENST00000309877 NGEFQ8N5V2 710 aa29.76■■■□□ 2.36
IRF3-201ENST00000309877 KIF24Q5T7B8 1368 aa29.76■■■□□ 2.35
IRF3-201ENST00000309877 PDE3BQ13370 1112 aa29.76■■■□□ 2.35
IRF3-201ENST00000309877 PEAK1Q9H792 1746 aa29.75■■■□□ 2.35
IRF3-201ENST00000309877 EIF4A2Q14240 407 aaKnown RBP29.75■■■□□ 2.35
IRF3-201ENST00000309877 PXDNQ92626 1479 aa29.75■■■□□ 2.35
IRF3-201ENST00000309877 PLEKHG5O94827 1062 aa29.74■■■□□ 2.35
IRF3-201ENST00000309877 FCHSD2O94868 740 aa29.74■■■□□ 2.35
IRF3-201ENST00000309877 GCP02774 474 aa29.73■■■□□ 2.35
IRF3-201ENST00000309877 TCP11L2Q8N4U5 519 aa29.73■■■□□ 2.35
IRF3-201ENST00000309877 USP19O94966 1318 aa29.73■■■□□ 2.35
IRF3-201ENST00000309877 TNS3Q68CZ2 1445 aa29.73■■■□□ 2.35
IRF3-201ENST00000309877 ALS2Q96Q42 1657 aa29.72■■■□□ 2.35
IRF3-201ENST00000309877 MAPK8IP3Q9UPT6 1336 aa29.72■■■□□ 2.35
IRF3-201ENST00000309877 PLEKHF1Q96S99 279 aa29.71■■■□□ 2.35
IRF3-201ENST00000309877 SPATA31A3Q5VYP0 1347 aa29.71■■■□□ 2.35
IRF3-201ENST00000309877 NFAT5O94916 1531 aa29.71■■■□□ 2.35
IRF3-201ENST00000309877 HOXC9P31274 260 aa29.7■■■□□ 2.35
IRF3-201ENST00000309877 SLIT3O75094 1523 aa29.7■■■□□ 2.35
IRF3-201ENST00000309877 NEFMP07197 916 aa29.69■■■□□ 2.34
IRF3-201ENST00000309877 HMOX1P09601 288 aa29.69■■■□□ 2.34
IRF3-201ENST00000309877 RTL1A6NKG5 1358 aa29.69■■■□□ 2.34
IRF3-201ENST00000309877 ARHGEF10O15013 1369 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms