RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 IGF1RP08069 1367 aa13.04□□□□□ -0.32
GGA2-201ENST00000309859 MAP4K4O95819 1239 aaPredicted RBP13.03□□□□□ -0.32
GGA2-201ENST00000309859 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
GGA2-201ENST00000309859 SETQ01105 290 aaPredicted RBP13.03□□□□□ -0.32
GGA2-201ENST00000309859 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
GGA2-201ENST00000309859 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
GGA2-201ENST00000309859 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
GGA2-201ENST00000309859 LEKR1Q6ZMV7 388 aa13.03□□□□□ -0.32
GGA2-201ENST00000309859 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
GGA2-201ENST00000309859 USP19O94966 1318 aa13.02□□□□□ -0.32
GGA2-201ENST00000309859 MTHFSP49914 203 aa13.02□□□□□ -0.32
GGA2-201ENST00000309859 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.32
GGA2-201ENST00000309859 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.32
GGA2-201ENST00000309859 NECTIN2Q92692 538 aa13.02□□□□□ -0.32
GGA2-201ENST00000309859 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
GGA2-201ENST00000309859 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
GGA2-201ENST00000309859 ATP6V1DQ9Y5K8 247 aa13.02□□□□□ -0.33
GGA2-201ENST00000309859 FERMT3Q86UX7 667 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 CCDC144AA2RUR9 1427 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 SMC2O95347 1197 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 OGFRQ9NZT2 677 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 H3BQV1 296 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 PTGS1P23219 599 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 UTP14CQ5TAP6 766 aaKnown RBP13.01□□□□□ -0.33
GGA2-201ENST00000309859 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 SMARCA4P51532 1647 aa13.01□□□□□ -0.33
GGA2-201ENST00000309859 DEF6Q9H4E7 631 aa13□□□□□ -0.33
GGA2-201ENST00000309859 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
GGA2-201ENST00000309859 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
GGA2-201ENST00000309859 ZNF500O60304 480 aaPredicted RBP13□□□□□ -0.33
GGA2-201ENST00000309859 LMAN1P49257 510 aa13□□□□□ -0.33
GGA2-201ENST00000309859 PTPN14Q15678 1187 aa13□□□□□ -0.33
GGA2-201ENST00000309859 TMEM63CQ9P1W3 806 aa13□□□□□ -0.33
GGA2-201ENST00000309859 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
GGA2-201ENST00000309859 TPM3P06753 285 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 MIA2Q96PC5 1412 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 HS1BP3Q53T59 392 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 CCDC186Q7Z3E2 898 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
GGA2-201ENST00000309859 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
GGA2-201ENST00000309859 TRIM27P14373 513 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 SSH1Q8WYL5 1049 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 TNMDQ9H2S6 317 aa12.99□□□□□ -0.33
GGA2-201ENST00000309859 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 HMOX1P09601 288 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 TERF1P54274 439 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 H0YHG0 523 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.98□□□□□ -0.33
GGA2-201ENST00000309859 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
GGA2-201ENST00000309859 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
GGA2-201ENST00000309859 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 CCDC34Q96HJ3 373 aa12.98□□□□□ -0.33
GGA2-201ENST00000309859 PDILTQ8N807 584 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 AK7Q96M32 723 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 TPM4P67936 248 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
GGA2-201ENST00000309859 SF3A1Q15459 793 aaKnown RBP12.97□□□□□ -0.33
GGA2-201ENST00000309859 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
GGA2-201ENST00000309859 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
GGA2-201ENST00000309859 HMMRO75330 724 aa12.96□□□□□ -0.33
GGA2-201ENST00000309859 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.33
GGA2-201ENST00000309859 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
GGA2-201ENST00000309859 STK3Q13188 491 aa12.96□□□□□ -0.34
GGA2-201ENST00000309859 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.34
GGA2-201ENST00000309859 HSP90B2PQ58FF3 399 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 KRBA2Q6ZNG9 492 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 UBXN4Q92575 508 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
GGA2-201ENST00000309859 KDM4AO75164 1064 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
GGA2-201ENST00000309859 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 ERC2O15083 957 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 SNX21Q969T3 373 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
GGA2-201ENST00000309859 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 FAM193AP78312 1265 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
GGA2-201ENST00000309859 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
GGA2-201ENST00000309859 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
GGA2-201ENST00000309859 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
GGA2-201ENST00000309859 ZNF445P59923 1031 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 NEK11Q8NG66 645 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
GGA2-201ENST00000309859 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
GGA2-201ENST00000309859 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
GGA2-201ENST00000309859 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
GGA2-201ENST00000309859 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms