RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 RGPD8O14715 1765 aaPredicted RBP18.89■□□□□ 0.61
EIF3F-201ENST00000309828 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.61
EIF3F-201ENST00000309828 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
EIF3F-201ENST00000309828 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
EIF3F-201ENST00000309828 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
EIF3F-201ENST00000309828 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
EIF3F-201ENST00000309828 BLMP54132 1417 aaPredicted RBP18.89■□□□□ 0.61
EIF3F-201ENST00000309828 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
EIF3F-201ENST00000309828 COG3Q96JB2 828 aa18.87■□□□□ 0.61
EIF3F-201ENST00000309828 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
EIF3F-201ENST00000309828 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
EIF3F-201ENST00000309828 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
EIF3F-201ENST00000309828 MTHFSP49914 203 aa18.86■□□□□ 0.61
EIF3F-201ENST00000309828 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
EIF3F-201ENST00000309828 NME9Q86XW9 330 aa18.85■□□□□ 0.61
EIF3F-201ENST00000309828 RBM33Q96EV2 1170 aaKnown RBP18.85■□□□□ 0.61
EIF3F-201ENST00000309828 USP31Q70CQ4 1352 aa18.83■□□□□ 0.61
EIF3F-201ENST00000309828 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.6
EIF3F-201ENST00000309828 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.6
EIF3F-201ENST00000309828 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
EIF3F-201ENST00000309828 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
EIF3F-201ENST00000309828 ATF3P18847 181 aa18.82■□□□□ 0.6
EIF3F-201ENST00000309828 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
EIF3F-201ENST00000309828 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
EIF3F-201ENST00000309828 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
EIF3F-201ENST00000309828 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
EIF3F-201ENST00000309828 USP54Q70EL1 1684 aa18.81■□□□□ 0.6
EIF3F-201ENST00000309828 MSH6P52701 1360 aa18.81■□□□□ 0.6
EIF3F-201ENST00000309828 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
EIF3F-201ENST00000309828 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
EIF3F-201ENST00000309828 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
EIF3F-201ENST00000309828 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
EIF3F-201ENST00000309828 MST1RQ04912 1400 aa18.79■□□□□ 0.6
EIF3F-201ENST00000309828 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
EIF3F-201ENST00000309828 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.6
EIF3F-201ENST00000309828 PIK3C2AO00443 1686 aa18.77■□□□□ 0.6
EIF3F-201ENST00000309828 POLKQ9UBT6 870 aa18.77■□□□□ 0.6
EIF3F-201ENST00000309828 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
EIF3F-201ENST00000309828 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
EIF3F-201ENST00000309828 NGEFQ8N5V2 710 aa18.76■□□□□ 0.59
EIF3F-201ENST00000309828 XIRP1Q702N8 1843 aaKnown RBP18.76■□□□□ 0.59
EIF3F-201ENST00000309828 PSME1Q06323 249 aa18.75■□□□□ 0.59
EIF3F-201ENST00000309828 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
EIF3F-201ENST00000309828 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
EIF3F-201ENST00000309828 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
EIF3F-201ENST00000309828 PDE3BQ13370 1112 aa18.73■□□□□ 0.59
EIF3F-201ENST00000309828 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
EIF3F-201ENST00000309828 NLRP6P59044 892 aa18.7■□□□□ 0.58
EIF3F-201ENST00000309828 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
EIF3F-201ENST00000309828 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
EIF3F-201ENST00000309828 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
EIF3F-201ENST00000309828 EMILIN1Q9Y6C2 1016 aa18.7■□□□□ 0.58
EIF3F-201ENST00000309828 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
EIF3F-201ENST00000309828 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
EIF3F-201ENST00000309828 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
EIF3F-201ENST00000309828 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
EIF3F-201ENST00000309828 FOXO3O43524 673 aa18.68■□□□□ 0.58
EIF3F-201ENST00000309828 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
EIF3F-201ENST00000309828 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
EIF3F-201ENST00000309828 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
EIF3F-201ENST00000309828 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
EIF3F-201ENST00000309828 FBLN1P23142 703 aa18.66■□□□□ 0.58
EIF3F-201ENST00000309828 RRS1Q15050 365 aaKnown RBP18.66■□□□□ 0.58
EIF3F-201ENST00000309828 NPHP3Q7Z494 1330 aa18.66■□□□□ 0.58
EIF3F-201ENST00000309828 SBNO1A3KN83 1393 aa18.66■□□□□ 0.58
EIF3F-201ENST00000309828 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
EIF3F-201ENST00000309828 U2SURPO15042 1029 aaKnown RBP18.65■□□□□ 0.58
EIF3F-201ENST00000309828 IL13P35225 146 aa18.65■□□□□ 0.58
EIF3F-201ENST00000309828 CCDC146Q8IYE0 955 aa18.65■□□□□ 0.58
EIF3F-201ENST00000309828 APAF1O14727 1248 aa18.64■□□□□ 0.57
EIF3F-201ENST00000309828 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
EIF3F-201ENST00000309828 FLT4P35916 1363 aa18.64■□□□□ 0.57
EIF3F-201ENST00000309828 SLIT3O75094 1523 aa18.64■□□□□ 0.57
EIF3F-201ENST00000309828 FCHSD2O94868 740 aa18.63■□□□□ 0.57
EIF3F-201ENST00000309828 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
EIF3F-201ENST00000309828 ZNF521Q96K83 1311 aa18.63■□□□□ 0.57
EIF3F-201ENST00000309828 RTL1A6NKG5 1358 aa18.63■□□□□ 0.57
EIF3F-201ENST00000309828 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
EIF3F-201ENST00000309828 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
EIF3F-201ENST00000309828 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
EIF3F-201ENST00000309828 NFAT5O94916 1531 aa18.61■□□□□ 0.57
EIF3F-201ENST00000309828 USP19O94966 1318 aa18.61■□□□□ 0.57
EIF3F-201ENST00000309828 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 PXDNQ92626 1479 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 BRINP3Q76B58 766 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
EIF3F-201ENST00000309828 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
EIF3F-201ENST00000309828 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
EIF3F-201ENST00000309828 MAPK8IP3Q9UPT6 1336 aa18.59■□□□□ 0.57
EIF3F-201ENST00000309828 AMPHP49418 695 aa18.59■□□□□ 0.57
EIF3F-201ENST00000309828 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
EIF3F-201ENST00000309828 GTF3C3Q9Y5Q9 886 aa18.59■□□□□ 0.57
EIF3F-201ENST00000309828 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.57
EIF3F-201ENST00000309828 NEFMP07197 916 aa18.58■□□□□ 0.56
EIF3F-201ENST00000309828 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.56
EIF3F-201ENST00000309828 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
EIF3F-201ENST00000309828 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
EIF3F-201ENST00000309828 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms