RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ERBB4Q15303 1308 aa17.96■□□□□ 0.47
SCUBE2-201ENST00000309263 GOLGA6L22H0YM25 854 aa17.96■□□□□ 0.47
SCUBE2-201ENST00000309263 FBLN1P23142 703 aa17.96■□□□□ 0.47
SCUBE2-201ENST00000309263 PKNOX2Q96KN3 472 aa17.96■□□□□ 0.47
SCUBE2-201ENST00000309263 MLECQ14165 292 aa17.95■□□□□ 0.46
SCUBE2-201ENST00000309263 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
SCUBE2-201ENST00000309263 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
SCUBE2-201ENST00000309263 NUTM2FA1L443 756 aa17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 SSFA2P28290 1259 aa17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 AAMPQ13685 434 aa17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 SYNMO15061 1565 aa17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
SCUBE2-201ENST00000309263 ERVK-7P63135 1459 aa17.93■□□□□ 0.46
SCUBE2-201ENST00000309263 FRMPD1Q5SYB0 1578 aa17.93■□□□□ 0.46
SCUBE2-201ENST00000309263 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SCUBE2-201ENST00000309263 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
SCUBE2-201ENST00000309263 ZMYND15Q9H091 742 aa17.93■□□□□ 0.46
SCUBE2-201ENST00000309263 ABCA6Q8N139 1617 aa17.92■□□□□ 0.46
SCUBE2-201ENST00000309263 UGGT1Q9NYU2 1555 aa17.92■□□□□ 0.46
SCUBE2-201ENST00000309263 RBM10P98175 930 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-201ENST00000309263 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
SCUBE2-201ENST00000309263 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-201ENST00000309263 HMOX1P09601 288 aa17.91■□□□□ 0.46
SCUBE2-201ENST00000309263 MCTP1Q6DN14 999 aa17.91■□□□□ 0.46
SCUBE2-201ENST00000309263 ATP10AO60312 1499 aa17.91■□□□□ 0.46
SCUBE2-201ENST00000309263 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
SCUBE2-201ENST00000309263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCUBE2-201ENST00000309263 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
SCUBE2-201ENST00000309263 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
SCUBE2-201ENST00000309263 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
SCUBE2-201ENST00000309263 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 NOS1P29475 1434 aa17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 KIAA1211Q6ZU35 1233 aa17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 FOXD4L6Q3SYB3 417 aaPredicted RBP17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 FOXD4L3Q6VB84 417 aaPredicted RBP17.88■□□□□ 0.45
SCUBE2-201ENST00000309263 SMC5Q8IY18 1101 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 UNC13BO14795 1591 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 MADDQ8WXG6 1647 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
SCUBE2-201ENST00000309263 K7ELQ4 463 aaPredicted RBP17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 TBC1D9Q6ZT07 1266 aa17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 LAMC1P11047 1609 aa17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
SCUBE2-201ENST00000309263 NUCB1Q02818 461 aa17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 FAM13BQ9NYF5 915 aa17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 KDM5AP29375 1690 aaKnown RBP17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 PTPRTO14522 1441 aa17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 RRP9O43818 475 aaKnown RBP17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
SCUBE2-201ENST00000309263 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 SKOR2Q2VWA4 1001 aaPredicted RBP17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 CHAMP1Q96JM3 812 aa17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
SCUBE2-201ENST00000309263 PRKAR2BP31323 418 aa17.83■□□□□ 0.45
SCUBE2-201ENST00000309263 RAB3GAP1Q15042 981 aa17.83■□□□□ 0.45
SCUBE2-201ENST00000309263 MPNDQ8N594 471 aa17.83■□□□□ 0.45
SCUBE2-201ENST00000309263 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.45
SCUBE2-201ENST00000309263 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.45
SCUBE2-201ENST00000309263 RBM25P49756 843 aaKnown RBP17.81■□□□□ 0.44
SCUBE2-201ENST00000309263 RNF214Q8ND24 703 aa17.81■□□□□ 0.44
SCUBE2-201ENST00000309263 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
SCUBE2-201ENST00000309263 ATAD2Q6PL18 1390 aa17.8■□□□□ 0.44
SCUBE2-201ENST00000309263 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
SCUBE2-201ENST00000309263 BAG4O95429 457 aaKnown RBP17.8■□□□□ 0.44
SCUBE2-201ENST00000309263 PKP1Q13835 747 aa17.8■□□□□ 0.44
SCUBE2-201ENST00000309263 CLTCL1P53675 1640 aa17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 RNF17Q9BXT8 1623 aaKnown RBP17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 ARHGEF40Q8TER5 1519 aa17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 SNX21Q969T3 373 aa17.79■□□□□ 0.44
SCUBE2-201ENST00000309263 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
SCUBE2-201ENST00000309263 CIZ1Q9ULV3 898 aaPredicted RBP17.78■□□□□ 0.44
SCUBE2-201ENST00000309263 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
SCUBE2-201ENST00000309263 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.44
SCUBE2-201ENST00000309263 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
SCUBE2-201ENST00000309263 MYOM1P52179 1685 aa17.77■□□□□ 0.43
SCUBE2-201ENST00000309263 CDC45O75419 566 aa17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 PTMAP06454 111 aaKnown RBP17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 ZSCAN30Q86W11 494 aa17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 KIF2CQ99661 725 aa17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
SCUBE2-201ENST00000309263 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
SCUBE2-201ENST00000309263 TRPM2O94759 1503 aa17.75■□□□□ 0.43
SCUBE2-201ENST00000309263 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
SCUBE2-201ENST00000309263 TERF2IPQ9NYB0 399 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms