RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 BARGINQ6ZT62 677 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 TRPV1Q8NER1 839 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 SLC24A3Q9HC58 644 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 FBRSL1Q9HCM7 1045 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 PASKQ96RG2 1323 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 ACIN1Q9UKV3 1341 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 FOXN3O00409 490 aaPredicted RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 C1orf216Q8TAB5 229 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 COL26A1Q96A83 441 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 NPDC1Q9NQX5 325 aaPredicted RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 DNAJC14Q6Y2X3 702 aaPredicted RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 ZAP70P43403 619 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 NLRP2Q9NX02 1062 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 KRT37O76014 449 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 NPTXRO95502 500 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 BAG2O95816 211 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 FAM69CQ0P6D2 419 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 DIS3LQ8TF46 1054 aaKnown RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 PAK3O75914 559 aaPredicted RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 DDIT3P35638 169 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 UBXN4Q92575 508 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 M0R2N6 131 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 PPFIA4O75335 1185 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 PRIM1P49642 420 aaKnown RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 TTC31Q49AM3 519 aaPredicted RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 TREX2Q9BQ50 279 aaPredicted RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 PODXL2Q9NZ53 605 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 MAGI1Q96QZ7 1491 aaPredicted RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 CALRP27797 417 aaKnown RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 DSG3P32926 999 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 GRIPAP1Q4V328 841 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.75□□□□□ -2.13
CEP290-201ENST00000309041 MINK1Q8N4C8 1332 aaPredicted RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 RTN1Q16799 776 aa1.75□□□□□ -2.13
CEP290-201ENST00000309041 ZNF579Q8NAF0 562 aaKnown RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 CWC15Q9P013 229 aaKnown RBP1.75□□□□□ -2.13
CEP290-201ENST00000309041 CCER2I3L3R5 266 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 ECM2O94769 699 aaPredicted RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 RRM1P23921 792 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 FOXD4Q12950 439 aaPredicted RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 CCDC105Q8IYK2 499 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 TDRD5Q8NAT2 981 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 FIZ1Q96SL8 496 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 LZTS2Q9BRK4 669 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 TARBP1Q13395 1621 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 ROBO2Q9HCK4 1378 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 ECT2LQ008S8 904 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 ZCRB1Q8TBF4 217 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 DKK3Q9UBP4 350 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 REXO2Q9Y3B8 237 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 ZCCHC11Q5TAX3 1644 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 DGKIO75912 1065 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 NLRP6P59044 892 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 HEATR4Q86WZ0 1026 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 GIGYF1O75420 1035 aaPredicted RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 CCAR1Q8IX12 1150 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 SLC43A3Q8NBI5 491 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 EGFL7Q9UHF1 273 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 FAM184BQ9ULE4 1060 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 UHRF1BP1LA0JNW5 1464 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 CAMSAP2Q08AD1 1489 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 POLE2P56282 527 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 MORC3Q14149 939 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 PROSER2Q86WR7 435 aaPredicted RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 STRIP2Q9ULQ0 834 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 JAG2Q9Y219 1238 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 TONSLQ96HA7 1378 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 SUPT5HO00267 1087 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 EHHADHQ08426 723 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 PPP2R2DQ66LE6 453 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 CDAN1Q8IWY9 1227 aa1.74□□□□□ -2.13
CEP290-201ENST00000309041 SMG6Q86US8 1419 aaKnown RBP1.74□□□□□ -2.13
CEP290-201ENST00000309041 RPL17P18621 184 aaKnown RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 HMBOX1Q6NT76 420 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 CCDC84Q86UT8 332 aaPredicted RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 AUTS2Q8WXX7 1259 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 GTF2IRD1Q9UHL9 959 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 KRT85P78386 507 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 IL31Q6EBC2 164 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 PRKAB1Q9Y478 270 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 PPRC1Q5VV67 1664 aaKnown RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 KIF24Q5T7B8 1368 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 STAG2Q8N3U4 1231 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 ARL10Q8N8L6 244 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 FBXW7Q969H0 707 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 TMEM79Q9BSE2 394 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 RB1CC1Q8TDY2 1594 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 WASHC2CQ9Y4E1 1318 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 NOL8Q76FK4 1167 aaKnown RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 MARCH10Q8NA82 808 aaPredicted RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 EIF3DO15371 548 aaKnown RBP eCLIP1.73□□□□□ -2.13
CEP290-201ENST00000309041 SIX3O95343 332 aaPredicted RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 ZNF518AQ6AHZ1 1483 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 NEURL4Q96JN8 1562 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 LCHNA4D1U4 455 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 OATP04181 439 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 BECN1Q14457 450 aa1.73□□□□□ -2.13
CEP290-201ENST00000309041 SF3A1Q15459 793 aaKnown RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 UTP14CQ5TAP6 766 aaKnown RBP1.73□□□□□ -2.13
CEP290-201ENST00000309041 METTL14Q9HCE5 456 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms