RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ADGRB2O60241 1585 aa31.56■■■□□ 2.64
RFWD2-201ENST00000308769 EDC4Q6P2E9 1401 aaKnown RBP31.56■■■□□ 2.64
RFWD2-201ENST00000308769 PTPRUQ92729 1446 aa31.56■■■□□ 2.64
RFWD2-201ENST00000308769 MAP2P11137 1827 aaKnown RBP31.55■■■□□ 2.64
RFWD2-201ENST00000308769 CCDC61Q9Y6R9 512 aa31.54■■■□□ 2.64
RFWD2-201ENST00000308769 C20orf194Q5TEA3 1177 aa31.53■■■□□ 2.64
RFWD2-201ENST00000308769 PRR36Q9H6K5 1346 aa31.53■■■□□ 2.64
RFWD2-201ENST00000308769 CRBNQ96SW2 442 aa31.52■■■□□ 2.64
RFWD2-201ENST00000308769 U2SURPO15042 1029 aaKnown RBP31.52■■■□□ 2.64
RFWD2-201ENST00000308769 PHF23Q9BUL5 403 aaPredicted RBP31.52■■■□□ 2.64
RFWD2-201ENST00000308769 FBLN1P23142 703 aa31.5■■■□□ 2.63
RFWD2-201ENST00000308769 RIMS1Q86UR5 1692 aaKnown RBP31.5■■■□□ 2.63
RFWD2-201ENST00000308769 PNPLA6Q8IY17 1366 aa31.5■■■□□ 2.63
RFWD2-201ENST00000308769 NME9Q86XW9 330 aa31.48■■■□□ 2.63
RFWD2-201ENST00000308769 THEMISQ8N1K5 641 aaPredicted RBP31.48■■■□□ 2.63
RFWD2-201ENST00000308769 TOPAZ1Q8N9V7 1692 aa31.48■■■□□ 2.63
RFWD2-201ENST00000308769 CCDC27Q2M243 656 aa31.45■■■□□ 2.63
RFWD2-201ENST00000308769 DIAPH1O60610 1272 aaKnown RBP31.45■■■□□ 2.62
RFWD2-201ENST00000308769 PLEKHF1Q96S99 279 aa31.45■■■□□ 2.62
RFWD2-201ENST00000308769 POLKQ9UBT6 870 aa31.45■■■□□ 2.62
RFWD2-201ENST00000308769 ZRANB1Q9UGI0 708 aa31.45■■■□□ 2.62
RFWD2-201ENST00000308769 CEP170BQ9Y4F5 1589 aaPredicted RBP31.45■■■□□ 2.62
RFWD2-201ENST00000308769 AMOTL2Q9Y2J4 779 aa31.43■■■□□ 2.62
RFWD2-201ENST00000308769 DIP2AQ14689 1571 aa31.43■■■□□ 2.62
RFWD2-201ENST00000308769 TBX22Q9Y458 520 aa31.43■■■□□ 2.62
RFWD2-201ENST00000308769 PPM1GO15355 546 aaPredicted RBP31.42■■■□□ 2.62
RFWD2-201ENST00000308769 WDR63Q8IWG1 891 aa31.42■■■□□ 2.62
RFWD2-201ENST00000308769 BCAR3O75815 825 aa31.42■■■□□ 2.62
RFWD2-201ENST00000308769 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.42■■■□□ 2.62
RFWD2-201ENST00000308769 NUTM2FA1L443 756 aa31.41■■■□□ 2.62
RFWD2-201ENST00000308769 NRKQ7Z2Y5 1582 aa31.4■■■□□ 2.62
RFWD2-201ENST00000308769 PTCH1Q13635 1447 aa31.39■■■□□ 2.62
RFWD2-201ENST00000308769 NCBP3Q53F19 620 aaKnown RBP31.39■■■□□ 2.61
RFWD2-201ENST00000308769 EMILIN1Q9Y6C2 1016 aa31.37■■■□□ 2.61
RFWD2-201ENST00000308769 XRN1Q8IZH2 1706 aaKnown RBP31.37■■■□□ 2.61
RFWD2-201ENST00000308769 ZNF692Q9BU19 519 aaPredicted RBP31.37■■■□□ 2.61
RFWD2-201ENST00000308769 LRRC7Q96NW7 1537 aa31.37■■■□□ 2.61
RFWD2-201ENST00000308769 MAPK8IP3Q9UPT6 1336 aa31.36■■■□□ 2.61
RFWD2-201ENST00000308769 TMPOP42166 694 aaKnown RBP31.35■■■□□ 2.61
RFWD2-201ENST00000308769 COG3Q96JB2 828 aa31.35■■■□□ 2.61
RFWD2-201ENST00000308769 RGPD8O14715 1765 aaPredicted RBP31.34■■■□□ 2.61
RFWD2-201ENST00000308769 ACEP12821 1306 aa31.33■■■□□ 2.61
RFWD2-201ENST00000308769 AATKQ6ZMQ8 1374 aa31.33■■■□□ 2.61
RFWD2-201ENST00000308769 CDK12Q9NYV4 1490 aaPredicted RBP31.33■■■□□ 2.61
RFWD2-201ENST00000308769 ADAMTSL3P82987 1691 aa31.3■■■□□ 2.6
RFWD2-201ENST00000308769 PLEKHG3A1L390 1219 aa31.3■■■□□ 2.6
RFWD2-201ENST00000308769 TRIM35Q9UPQ4 493 aa31.3■■■□□ 2.6
RFWD2-201ENST00000308769 ZNF142P52746 1687 aaPredicted RBP31.29■■■□□ 2.6
RFWD2-201ENST00000308769 RRS1Q15050 365 aaKnown RBP31.28■■■□□ 2.6
RFWD2-201ENST00000308769 USP6P35125 1406 aa31.28■■■□□ 2.6
RFWD2-201ENST00000308769 MYH16Q9H6N6 1097 aa31.28■■■□□ 2.6
RFWD2-201ENST00000308769 TTC21BQ7Z4L5 1316 aa31.28■■■□□ 2.6
RFWD2-201ENST00000308769 FCHSD2O94868 740 aa31.27■■■□□ 2.6
RFWD2-201ENST00000308769 RSPH6AQ9H0K4 717 aa31.27■■■□□ 2.6
RFWD2-201ENST00000308769 PNNQ9H307 717 aaKnown RBP31.26■■■□□ 2.59
RFWD2-201ENST00000308769 PRKAR2BP31323 418 aa31.25■■■□□ 2.59
RFWD2-201ENST00000308769 RARSP54136 660 aaKnown RBP31.25■■■□□ 2.59
RFWD2-201ENST00000308769 RIPK4P57078 832 aa31.24■■■□□ 2.59
RFWD2-201ENST00000308769 KCNA6P17658 529 aa31.24■■■□□ 2.59
RFWD2-201ENST00000308769 IL13P35225 146 aa31.24■■■□□ 2.59
RFWD2-201ENST00000308769 HMOX1P09601 288 aa31.23■■■□□ 2.59
RFWD2-201ENST00000308769 NALCNQ8IZF0 1738 aa31.23■■■□□ 2.59
RFWD2-201ENST00000308769 TSR2Q969E8 191 aaKnown RBP31.22■■■□□ 2.59
RFWD2-201ENST00000308769 OVOS2A0A0J9YW53 1432 aa31.22■■■□□ 2.59
RFWD2-201ENST00000308769 OVOS2Q6IE36 1432 aa31.22■■■□□ 2.59
RFWD2-201ENST00000308769 FANCIQ9NVI1 1328 aa31.22■■■□□ 2.59
RFWD2-201ENST00000308769 PMFBP1Q8TBY8 1022 aa31.21■■■□□ 2.59
RFWD2-201ENST00000308769 CANXP27824 592 aaKnown RBP31.19■■■□□ 2.58
RFWD2-201ENST00000308769 PIK3R4Q99570 1358 aa31.19■■■□□ 2.58
RFWD2-201ENST00000308769 SSH2Q76I76 1423 aa31.19■■■□□ 2.58
RFWD2-201ENST00000308769 SETD1BQ9UPS6 1966 aaKnown RBP31.18■■■□□ 2.58
RFWD2-201ENST00000308769 CHD2O14647 1828 aaKnown RBP31.18■■■□□ 2.58
RFWD2-201ENST00000308769 FRAT1Q92837 279 aaPredicted RBP31.18■■■□□ 2.58
RFWD2-201ENST00000308769 BCL2L13Q9BXK5 485 aa31.18■■■□□ 2.58
RFWD2-201ENST00000308769 KDM2BQ8NHM5 1336 aa31.17■■■□□ 2.58
RFWD2-201ENST00000308769 PDE3AQ14432 1141 aa31.17■■■□□ 2.58
RFWD2-201ENST00000308769 PHACTR3Q96KR7 559 aa31.16■■■□□ 2.58
RFWD2-201ENST00000308769 FMN2Q9NZ56 1722 aa31.15■■■□□ 2.58
RFWD2-201ENST00000308769 ANKLE2Q86XL3 938 aa31.15■■■□□ 2.58
RFWD2-201ENST00000308769 NEFMP07197 916 aa31.15■■■□□ 2.58
RFWD2-201ENST00000308769 PANK1Q8TE04 598 aa31.15■■■□□ 2.58
RFWD2-201ENST00000308769 IL16Q14005 1332 aa31.14■■■□□ 2.58
RFWD2-201ENST00000308769 DLG5Q8TDM6 1919 aa31.14■■■□□ 2.58
RFWD2-201ENST00000308769 PEAK1Q9H792 1746 aa31.14■■■□□ 2.58
RFWD2-201ENST00000308769 EXOSC9Q06265 439 aaKnown RBP31.12■■■□□ 2.57
RFWD2-201ENST00000308769 SKAP1Q86WV1 359 aa31.12■■■□□ 2.57
RFWD2-201ENST00000308769 NGDNQ8NEJ9 315 aaKnown RBP31.11■■■□□ 2.57
RFWD2-201ENST00000308769 TCERG1O14776 1098 aaKnown RBP31.1■■■□□ 2.57
RFWD2-201ENST00000308769 COG6Q9Y2V7 657 aa31.1■■■□□ 2.57
RFWD2-201ENST00000308769 NFE2L2Q16236 605 aa31.1■■■□□ 2.57
RFWD2-201ENST00000308769 CENPQQ7L2Z9 268 aaPredicted RBP31.1■■■□□ 2.57
RFWD2-201ENST00000308769 USP31Q70CQ4 1352 aa31.1■■■□□ 2.57
RFWD2-201ENST00000308769 ANKARQ7Z5J8 1434 aa31.09■■■□□ 2.57
RFWD2-201ENST00000308769 TTC21AQ8NDW8 1320 aa31.09■■■□□ 2.57
RFWD2-201ENST00000308769 PIK3C2AO00443 1686 aa31.09■■■□□ 2.57
RFWD2-201ENST00000308769 TNNQ9UQP3 1299 aa31.09■■■□□ 2.57
RFWD2-201ENST00000308769 SOX12O15370 315 aa31.07■■■□□ 2.56
RFWD2-201ENST00000308769 CT47B1P0C2W7 299 aaPredicted RBP31.07■■■□□ 2.56
RFWD2-201ENST00000308769 EIF4A2Q14240 407 aaKnown RBP31.06■■■□□ 2.56
RFWD2-201ENST00000308769 RLBP1P12271 317 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms