RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
MSRB3-201ENST00000308259 ZSCAN30Q86W11 494 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 NOS1P29475 1434 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 TRPM2O94759 1503 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
MSRB3-201ENST00000308259 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
MSRB3-201ENST00000308259 SYNMO15061 1565 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
MSRB3-201ENST00000308259 PTPRTO14522 1441 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 DDX11L8A8MPP1 907 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
MSRB3-201ENST00000308259 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
MSRB3-201ENST00000308259 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
MSRB3-201ENST00000308259 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
MSRB3-201ENST00000308259 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
MSRB3-201ENST00000308259 KCNJ4P48050 445 aa12.97□□□□□ -0.33
MSRB3-201ENST00000308259 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
MSRB3-201ENST00000308259 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
MSRB3-201ENST00000308259 USP19O94966 1318 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 TPRNQ4KMQ1 711 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 MYOM1P52179 1685 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 CGNL1Q0VF96 1302 aa12.96□□□□□ -0.33
MSRB3-201ENST00000308259 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
MSRB3-201ENST00000308259 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
MSRB3-201ENST00000308259 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
MSRB3-201ENST00000308259 NEO1Q92859 1461 aa12.94□□□□□ -0.34
MSRB3-201ENST00000308259 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
MSRB3-201ENST00000308259 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
MSRB3-201ENST00000308259 CSPP1Q1MSJ5 1256 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 FBLN1P23142 703 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
MSRB3-201ENST00000308259 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
MSRB3-201ENST00000308259 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
MSRB3-201ENST00000308259 DDX49Q9Y6V7 483 aaKnown RBP12.92□□□□□ -0.34
MSRB3-201ENST00000308259 SHROOM2Q13796 1616 aa12.92□□□□□ -0.34
MSRB3-201ENST00000308259 ABCA6Q8N139 1617 aa12.92□□□□□ -0.34
MSRB3-201ENST00000308259 ZNF830Q96NB3 372 aaPredicted RBP12.92□□□□□ -0.34
MSRB3-201ENST00000308259 ZBTB22O15209 634 aa12.92□□□□□ -0.34
MSRB3-201ENST00000308259 OFD1O75665 1012 aa12.92□□□□□ -0.34
MSRB3-201ENST00000308259 ERBB4Q15303 1308 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
MSRB3-201ENST00000308259 KIAA2012Q0VF49 1180 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 RTEL1-TNFRSF6BF6WH68 1400 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 LETM1O95202 739 aaPredicted RBP12.91□□□□□ -0.34
MSRB3-201ENST00000308259 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
MSRB3-201ENST00000308259 DMTNQ08495 405 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 MPNDQ8N594 471 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 CEP152O94986 1710 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
MSRB3-201ENST00000308259 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
MSRB3-201ENST00000308259 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
MSRB3-201ENST00000308259 KIF20AO95235 890 aa12.9□□□□□ -0.34
MSRB3-201ENST00000308259 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
MSRB3-201ENST00000308259 SMC4Q9NTJ3 1288 aa12.9□□□□□ -0.34
MSRB3-201ENST00000308259 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
MSRB3-201ENST00000308259 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
MSRB3-201ENST00000308259 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
MSRB3-201ENST00000308259 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
MSRB3-201ENST00000308259 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 CNPY4Q8N129 248 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 ERICH4A6NGS2 130 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
MSRB3-201ENST00000308259 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 TET3O43151 1660 aa12.88□□□□□ -0.35
MSRB3-201ENST00000308259 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
MSRB3-201ENST00000308259 RIPK4P57078 832 aa12.87□□□□□ -0.35
MSRB3-201ENST00000308259 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
MSRB3-201ENST00000308259 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
MSRB3-201ENST00000308259 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
MSRB3-201ENST00000308259 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
MSRB3-201ENST00000308259 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
MSRB3-201ENST00000308259 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
MSRB3-201ENST00000308259 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
MSRB3-201ENST00000308259 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
MSRB3-201ENST00000308259 RWDD1Q9H446 243 aaPredicted RBP12.86□□□□□ -0.35
MSRB3-201ENST00000308259 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
MSRB3-201ENST00000308259 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
MSRB3-201ENST00000308259 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 NPATQ14207 1427 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 TRIM27P14373 513 aa12.85□□□□□ -0.35
MSRB3-201ENST00000308259 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
MSRB3-201ENST00000308259 EVC2Q86UK5 1308 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms