RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.74□□□□□ -0.85
CLCN5-201ENST00000307367 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
CLCN5-201ENST00000307367 C19orf44Q9H6X5 657 aa9.74□□□□□ -0.85
CLCN5-201ENST00000307367 DCCP43146 1447 aa9.74□□□□□ -0.85
CLCN5-201ENST00000307367 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
CLCN5-201ENST00000307367 TMEM94Q12767 1356 aa9.73□□□□□ -0.85
CLCN5-201ENST00000307367 NGDNQ8NEJ9 315 aaKnown RBP9.73□□□□□ -0.85
CLCN5-201ENST00000307367 SSH2Q76I76 1423 aa9.73□□□□□ -0.85
CLCN5-201ENST00000307367 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
CLCN5-201ENST00000307367 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
CLCN5-201ENST00000307367 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
CLCN5-201ENST00000307367 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
CLCN5-201ENST00000307367 XIRP1Q702N8 1843 aaKnown RBP9.72□□□□□ -0.85
CLCN5-201ENST00000307367 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
CLCN5-201ENST00000307367 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.85
CLCN5-201ENST00000307367 MTHFSP49914 203 aa9.71□□□□□ -0.86
CLCN5-201ENST00000307367 WDR43Q15061 677 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLCN5-201ENST00000307367 NME9Q86XW9 330 aa9.71□□□□□ -0.86
CLCN5-201ENST00000307367 COG3Q96JB2 828 aa9.71□□□□□ -0.86
CLCN5-201ENST00000307367 CFAP53Q96M91 514 aa9.71□□□□□ -0.86
CLCN5-201ENST00000307367 KIF1AQ12756 1690 aa9.71□□□□□ -0.86
CLCN5-201ENST00000307367 ZBED9Q6R2W3 1325 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 SHPRHQ149N8 1683 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 AATKQ6ZMQ8 1374 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 BLMP54132 1417 aaPredicted RBP9.7□□□□□ -0.86
CLCN5-201ENST00000307367 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 LRRC7Q96NW7 1537 aa9.7□□□□□ -0.86
CLCN5-201ENST00000307367 ATF3P18847 181 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 ESCO1Q5FWF5 840 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 MSH6P52701 1360 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 C1orf167Q5SNV9 1468 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
CLCN5-201ENST00000307367 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 ADAMTS8Q9UP79 889 aa9.69□□□□□ -0.86
CLCN5-201ENST00000307367 MST1RQ04912 1400 aa9.68□□□□□ -0.86
CLCN5-201ENST00000307367 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
CLCN5-201ENST00000307367 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
CLCN5-201ENST00000307367 PNPLA6Q8IY17 1366 aa9.67□□□□□ -0.86
CLCN5-201ENST00000307367 ADRA2BP18089 450 aa9.67□□□□□ -0.86
CLCN5-201ENST00000307367 ZRANB1Q9UGI0 708 aa9.67□□□□□ -0.86
CLCN5-201ENST00000307367 COL3A1P02461 1466 aaPredicted RBP9.67□□□□□ -0.86
CLCN5-201ENST00000307367 POLKQ9UBT6 870 aa9.67□□□□□ -0.86
CLCN5-201ENST00000307367 ORAI2Q96SN7 254 aa9.66□□□□□ -0.86
CLCN5-201ENST00000307367 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
CLCN5-201ENST00000307367 MARF1Q9Y4F3 1742 aaKnown RBP9.66□□□□□ -0.86
CLCN5-201ENST00000307367 PSME1Q06323 249 aa9.66□□□□□ -0.86
CLCN5-201ENST00000307367 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
CLCN5-201ENST00000307367 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
CLCN5-201ENST00000307367 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
CLCN5-201ENST00000307367 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
CLCN5-201ENST00000307367 FOXO3O43524 673 aa9.64□□□□□ -0.87
CLCN5-201ENST00000307367 NLRP6P59044 892 aa9.64□□□□□ -0.87
CLCN5-201ENST00000307367 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
CLCN5-201ENST00000307367 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
CLCN5-201ENST00000307367 FBLN1P23142 703 aa9.63□□□□□ -0.87
CLCN5-201ENST00000307367 RRS1Q15050 365 aaKnown RBP9.63□□□□□ -0.87
CLCN5-201ENST00000307367 PPM1GO15355 546 aaPredicted RBP9.62□□□□□ -0.87
CLCN5-201ENST00000307367 NGEFQ8N5V2 710 aa9.62□□□□□ -0.87
CLCN5-201ENST00000307367 KRT28Q7Z3Y7 464 aa9.62□□□□□ -0.87
CLCN5-201ENST00000307367 ALS2Q96Q42 1657 aa9.62□□□□□ -0.87
CLCN5-201ENST00000307367 NPHP3Q7Z494 1330 aa9.61□□□□□ -0.87
CLCN5-201ENST00000307367 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
CLCN5-201ENST00000307367 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLCN5-201ENST00000307367 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
CLCN5-201ENST00000307367 KIF24Q5T7B8 1368 aa9.61□□□□□ -0.87
CLCN5-201ENST00000307367 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
CLCN5-201ENST00000307367 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
CLCN5-201ENST00000307367 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
CLCN5-201ENST00000307367 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 PNNQ9H307 717 aaKnown RBP9.6□□□□□ -0.87
CLCN5-201ENST00000307367 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 LTBP4Q8N2S1 1624 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 LTN1O94822 1766 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 SBNO1A3KN83 1393 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 NUTM2GQ5VZR2 741 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 FLT4P35916 1363 aa9.6□□□□□ -0.87
CLCN5-201ENST00000307367 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 KCNA4P22459 653 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 IL13P35225 146 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 SLIT3O75094 1523 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 IQSEC2Q5JU85 1478 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 APAF1O14727 1248 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
CLCN5-201ENST00000307367 BRINP3Q76B58 766 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 NFAT5O94916 1531 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 PHRF1Q9P1Y6 1649 aaKnown RBP9.59□□□□□ -0.87
CLCN5-201ENST00000307367 PXDNQ92626 1479 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 SOX12O15370 315 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 FCHSD2O94868 740 aa9.59□□□□□ -0.87
CLCN5-201ENST00000307367 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
CLCN5-201ENST00000307367 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
CLCN5-201ENST00000307367 SENP3-EIF4A1A0A087X0R7 540 aa9.58□□□□□ -0.88
CLCN5-201ENST00000307367 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
CLCN5-201ENST00000307367 USP19O94966 1318 aa9.58□□□□□ -0.88
CLCN5-201ENST00000307367 TNS3Q68CZ2 1445 aa9.58□□□□□ -0.88
CLCN5-201ENST00000307367 AMPHP49418 695 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms