RNA–Protein interactions for RNA: ENST00000306077.4

TMEM43-201, Transcript of transmembrane protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM43, Length 3,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-201ENST00000306077 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
TMEM43-201ENST00000306077 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
TMEM43-201ENST00000306077 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
TMEM43-201ENST00000306077 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
TMEM43-201ENST00000306077 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 LRRC7Q96NW7 1537 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 TCP11L2Q8N4U5 519 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 TRAK1Q9UPV9 953 aa11.29□□□□□ -0.6
TMEM43-201ENST00000306077 ATP7BP35670 1465 aa11.28□□□□□ -0.6
TMEM43-201ENST00000306077 C3P01024 1663 aa11.28□□□□□ -0.6
TMEM43-201ENST00000306077 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
TMEM43-201ENST00000306077 YTHDC2Q9H6S0 1430 aaKnown RBP11.27□□□□□ -0.6
TMEM43-201ENST00000306077 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
TMEM43-201ENST00000306077 IL16Q14005 1332 aa11.27□□□□□ -0.61
TMEM43-201ENST00000306077 DIP2BQ9P265 1576 aa11.27□□□□□ -0.61
TMEM43-201ENST00000306077 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
TMEM43-201ENST00000306077 YEATS2Q9ULM3 1422 aa11.27□□□□□ -0.61
TMEM43-201ENST00000306077 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
TMEM43-201ENST00000306077 BECN1Q14457 450 aa11.27□□□□□ -0.61
TMEM43-201ENST00000306077 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 MTHFSP49914 203 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 RAPGEF3O95398 923 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 RLBP1P12271 317 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 PMFBP1Q8TBY8 1022 aa11.26□□□□□ -0.61
TMEM43-201ENST00000306077 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
TMEM43-201ENST00000306077 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
TMEM43-201ENST00000306077 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
TMEM43-201ENST00000306077 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
TMEM43-201ENST00000306077 FAM135BQ49AJ0 1406 aa11.25□□□□□ -0.61
TMEM43-201ENST00000306077 CFAP53Q96M91 514 aa11.24□□□□□ -0.61
TMEM43-201ENST00000306077 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
TMEM43-201ENST00000306077 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
TMEM43-201ENST00000306077 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM43-201ENST00000306077 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
TMEM43-201ENST00000306077 CPS1P31327 1500 aa11.23□□□□□ -0.61
TMEM43-201ENST00000306077 MYH16Q9H6N6 1097 aa11.23□□□□□ -0.61
TMEM43-201ENST00000306077 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
TMEM43-201ENST00000306077 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
TMEM43-201ENST00000306077 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
TMEM43-201ENST00000306077 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
TMEM43-201ENST00000306077 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
TMEM43-201ENST00000306077 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
TMEM43-201ENST00000306077 IDI1Q13907 227 aa11.22□□□□□ -0.61
TMEM43-201ENST00000306077 AEBP2Q6ZN18 517 aaPredicted RBP11.22□□□□□ -0.61
TMEM43-201ENST00000306077 TSR2Q969E8 191 aaKnown RBP11.22□□□□□ -0.61
TMEM43-201ENST00000306077 PIK3R4Q99570 1358 aa11.21□□□□□ -0.61
TMEM43-201ENST00000306077 CDK12Q9NYV4 1490 aaPredicted RBP11.21□□□□□ -0.61
TMEM43-201ENST00000306077 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.62
TMEM43-201ENST00000306077 GGT6Q6P531 493 aa11.21□□□□□ -0.62
TMEM43-201ENST00000306077 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.62
TMEM43-201ENST00000306077 ANTXR1Q9H6X2 564 aa11.21□□□□□ -0.62
TMEM43-201ENST00000306077 STK26Q9P289 416 aa11.21□□□□□ -0.62
TMEM43-201ENST00000306077 TBC1D32Q96NH3 1257 aa11.2□□□□□ -0.62
TMEM43-201ENST00000306077 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
TMEM43-201ENST00000306077 RIMS1Q86UR5 1692 aaKnown RBP11.2□□□□□ -0.62
TMEM43-201ENST00000306077 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
TMEM43-201ENST00000306077 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
TMEM43-201ENST00000306077 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 TECPR2O15040 1411 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 PTCH1Q13635 1447 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
TMEM43-201ENST00000306077 NCOA3Q9Y6Q9 1424 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 FYB1O15117 783 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
TMEM43-201ENST00000306077 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
TMEM43-201ENST00000306077 TUBGCP6Q96RT7 1819 aa11.18□□□□□ -0.62
TMEM43-201ENST00000306077 ZKSCAN2Q63HK3 967 aa11.18□□□□□ -0.62
TMEM43-201ENST00000306077 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
TMEM43-201ENST00000306077 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
TMEM43-201ENST00000306077 SMC4Q9NTJ3 1288 aa11.17□□□□□ -0.62
TMEM43-201ENST00000306077 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
TMEM43-201ENST00000306077 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
TMEM43-201ENST00000306077 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
TMEM43-201ENST00000306077 USP54Q70EL1 1684 aa11.16□□□□□ -0.62
TMEM43-201ENST00000306077 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
TMEM43-201ENST00000306077 PPP6R1Q9UPN7 881 aa11.16□□□□□ -0.62
TMEM43-201ENST00000306077 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
TMEM43-201ENST00000306077 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
TMEM43-201ENST00000306077 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
TMEM43-201ENST00000306077 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.62
TMEM43-201ENST00000306077 TSPOAP1O95153 1857 aa11.15□□□□□ -0.62
TMEM43-201ENST00000306077 TRIM27P14373 513 aa11.15□□□□□ -0.62
TMEM43-201ENST00000306077 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
TMEM43-201ENST00000306077 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
TMEM43-201ENST00000306077 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
TMEM43-201ENST00000306077 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
TMEM43-201ENST00000306077 APBB1O00213 710 aa11.13□□□□□ -0.63
TMEM43-201ENST00000306077 FBLN1P23142 703 aa11.13□□□□□ -0.63
TMEM43-201ENST00000306077 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms