RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TMEM132EQ6IEE7 984 aa10.1□□□□□ -0.79
NKRF-201ENST00000304449 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
NKRF-201ENST00000304449 TRIM44Q96DX7 344 aaPredicted RBP10.09□□□□□ -0.79
NKRF-201ENST00000304449 PNPLA6Q8IY17 1366 aa10.09□□□□□ -0.79
NKRF-201ENST00000304449 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
NKRF-201ENST00000304449 PREX1Q8TCU6 1659 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 TBC1D32Q96NH3 1257 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 MYH16Q9H6N6 1097 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 A0A1W2PP64 1363 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 RBM10P98175 930 aaKnown RBP10.08□□□□□ -0.8
NKRF-201ENST00000304449 PMFBP1Q8TBY8 1022 aa10.08□□□□□ -0.8
NKRF-201ENST00000304449 NEO1Q92859 1461 aa10.07□□□□□ -0.8
NKRF-201ENST00000304449 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
NKRF-201ENST00000304449 CLCN1P35523 988 aa10.07□□□□□ -0.8
NKRF-201ENST00000304449 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
NKRF-201ENST00000304449 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
NKRF-201ENST00000304449 UPF2Q9HAU5 1272 aaKnown RBP10.06□□□□□ -0.8
NKRF-201ENST00000304449 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
NKRF-201ENST00000304449 MVPQ14764 893 aaKnown RBP10.06□□□□□ -0.8
NKRF-201ENST00000304449 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
NKRF-201ENST00000304449 ARHGEF40Q8TER5 1519 aa10.05□□□□□ -0.8
NKRF-201ENST00000304449 ESPNB1AK53 854 aa10.05□□□□□ -0.8
NKRF-201ENST00000304449 ZBTB7CA1YPR0 619 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 TRAK2O60296 914 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 TNNT2P45379 298 aaPredicted RBP10.04□□□□□ -0.8
NKRF-201ENST00000304449 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
NKRF-201ENST00000304449 IL16Q14005 1332 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
NKRF-201ENST00000304449 MCM4P33991 863 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
NKRF-201ENST00000304449 BCL2L13Q9BXK5 485 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 RIMBP3CA6NJZ7 1639 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 RIMBP3BA6NNM3 1639 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 RIMBP3Q9UFD9 1639 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 ALKQ9UM73 1620 aa10.03□□□□□ -0.8
NKRF-201ENST00000304449 CABP2Q9NPB3 220 aa10.02□□□□□ -0.8
NKRF-201ENST00000304449 FAM13BQ9NYF5 915 aa10.02□□□□□ -0.8
NKRF-201ENST00000304449 LRRC7Q96NW7 1537 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 NCOA3Q9Y6Q9 1424 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 FYB1O15117 783 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 TRIM27P14373 513 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
NKRF-201ENST00000304449 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 IDI1Q13907 227 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 GGT6Q6P531 493 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 CFAP53Q96M91 514 aa10.02□□□□□ -0.81
NKRF-201ENST00000304449 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 DDIT3P35638 169 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 YTHDC2Q9H6S0 1430 aaKnown RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 DLC1Q96QB1 1528 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 SSH1Q8WYL5 1049 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
NKRF-201ENST00000304449 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
NKRF-201ENST00000304449 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
NKRF-201ENST00000304449 U2AF1L5P0DN76 240 aaPredicted RBP10□□□□□ -0.81
NKRF-201ENST00000304449 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
NKRF-201ENST00000304449 U2AF1Q01081 240 aaKnown RBP eCLIP10□□□□□ -0.81
NKRF-201ENST00000304449 EXOSC9Q06265 439 aaKnown RBP10□□□□□ -0.81
NKRF-201ENST00000304449 ATAD2Q6PL18 1390 aa10□□□□□ -0.81
NKRF-201ENST00000304449 PIK3R4Q99570 1358 aa10□□□□□ -0.81
NKRF-201ENST00000304449 MRE11P49959 708 aa9.99□□□□□ -0.81
NKRF-201ENST00000304449 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
NKRF-201ENST00000304449 ATF7IPQ6VMQ6 1270 aa9.99□□□□□ -0.81
NKRF-201ENST00000304449 NRXN3Q9Y4C0 1643 aa9.98□□□□□ -0.81
NKRF-201ENST00000304449 NUTM2DQ5VT03 806 aaPredicted RBP9.98□□□□□ -0.81
NKRF-201ENST00000304449 SLC52A1Q9NWF4 448 aa9.98□□□□□ -0.81
NKRF-201ENST00000304449 RAPGEF3O95398 923 aa9.98□□□□□ -0.81
NKRF-201ENST00000304449 MAP2P11137 1827 aaKnown RBP9.98□□□□□ -0.81
NKRF-201ENST00000304449 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 PRDM10Q9NQV6 1147 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 KNDC1Q76NI1 1749 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 NOB1Q9ULX3 412 aaKnown RBP9.97□□□□□ -0.81
NKRF-201ENST00000304449 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
NKRF-201ENST00000304449 ATP7BP35670 1465 aa9.96□□□□□ -0.81
NKRF-201ENST00000304449 ALDH1L2Q3SY69 923 aa9.96□□□□□ -0.81
NKRF-201ENST00000304449 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.81
NKRF-201ENST00000304449 CPSF1Q10570 1443 aaKnown RBP9.96□□□□□ -0.82
NKRF-201ENST00000304449 NUCB1Q02818 461 aa9.96□□□□□ -0.82
NKRF-201ENST00000304449 TMEM57Q8N5G2 664 aa9.96□□□□□ -0.82
NKRF-201ENST00000304449 MON2Q7Z3U7 1717 aa9.96□□□□□ -0.82
NKRF-201ENST00000304449 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
NKRF-201ENST00000304449 PDCL3Q9H2J4 239 aa9.95□□□□□ -0.82
NKRF-201ENST00000304449 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
NKRF-201ENST00000304449 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
NKRF-201ENST00000304449 SMC4Q9NTJ3 1288 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms