RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
HMGN1P35-201ENST00000303758 CRYBG1Q9Y4K1 1723 aa15.57■□□□□ 0.08
HMGN1P35-201ENST00000303758 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
HMGN1P35-201ENST00000303758 TONSLQ96HA7 1378 aa15.56■□□□□ 0.08
HMGN1P35-201ENST00000303758 SLIT2O94813 1529 aa15.56■□□□□ 0.08
HMGN1P35-201ENST00000303758 PHRF1Q9P1Y6 1649 aaKnown RBP15.55■□□□□ 0.08
HMGN1P35-201ENST00000303758 COL14A1Q05707 1796 aaKnown RBP15.54■□□□□ 0.08
HMGN1P35-201ENST00000303758 UNC5CLQ8IV45 518 aa15.54■□□□□ 0.08
HMGN1P35-201ENST00000303758 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
HMGN1P35-201ENST00000303758 PPIP5K1Q6PFW1 1433 aa15.53■□□□□ 0.08
HMGN1P35-201ENST00000303758 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGN1P35-201ENST00000303758 NRAPQ86VF7 1730 aa15.52■□□□□ 0.08
HMGN1P35-201ENST00000303758 ACEP12821 1306 aa15.52■□□□□ 0.08
HMGN1P35-201ENST00000303758 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
HMGN1P35-201ENST00000303758 GLI3P10071 1580 aa15.52■□□□□ 0.07
HMGN1P35-201ENST00000303758 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
HMGN1P35-201ENST00000303758 POLR3AO14802 1390 aaPredicted RBP15.51■□□□□ 0.07
HMGN1P35-201ENST00000303758 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
HMGN1P35-201ENST00000303758 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
HMGN1P35-201ENST00000303758 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
HMGN1P35-201ENST00000303758 CABP2Q9NPB3 220 aa15.5■□□□□ 0.07
HMGN1P35-201ENST00000303758 PLEKHG3A1L390 1219 aa15.49■□□□□ 0.07
HMGN1P35-201ENST00000303758 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
HMGN1P35-201ENST00000303758 BRWD3Q6RI45 1802 aa15.48■□□□□ 0.07
HMGN1P35-201ENST00000303758 EP400Q96L91 3159 aa15.48■□□□□ 0.07
HMGN1P35-201ENST00000303758 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
HMGN1P35-201ENST00000303758 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
HMGN1P35-201ENST00000303758 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
HMGN1P35-201ENST00000303758 NRKQ7Z2Y5 1582 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 VPS72Q15906 364 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 CARD11Q9BXL7 1154 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 BTG4Q9NY30 223 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
HMGN1P35-201ENST00000303758 A0A0G2JS52 829 aa15.45■□□□□ 0.06
HMGN1P35-201ENST00000303758 MYT1Q01538 1121 aa15.45■□□□□ 0.06
HMGN1P35-201ENST00000303758 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
HMGN1P35-201ENST00000303758 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
HMGN1P35-201ENST00000303758 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
HMGN1P35-201ENST00000303758 USP6P35125 1406 aa15.43■□□□□ 0.06
HMGN1P35-201ENST00000303758 ZC3H6P61129 1189 aaKnown RBP15.42■□□□□ 0.06
HMGN1P35-201ENST00000303758 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
HMGN1P35-201ENST00000303758 SBNO2Q9Y2G9 1366 aa15.41■□□□□ 0.06
HMGN1P35-201ENST00000303758 NLRP13Q86W25 1043 aa15.41■□□□□ 0.06
HMGN1P35-201ENST00000303758 SEPT12Q8IYM1 358 aa15.41■□□□□ 0.06
HMGN1P35-201ENST00000303758 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
HMGN1P35-201ENST00000303758 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
HMGN1P35-201ENST00000303758 MON2Q7Z3U7 1717 aa15.4■□□□□ 0.06
HMGN1P35-201ENST00000303758 USP19O94966 1318 aa15.39■□□□□ 0.05
HMGN1P35-201ENST00000303758 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
HMGN1P35-201ENST00000303758 STRN4Q9NRL3 753 aa15.38■□□□□ 0.05
HMGN1P35-201ENST00000303758 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
HMGN1P35-201ENST00000303758 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
HMGN1P35-201ENST00000303758 NLRP6P59044 892 aa15.37■□□□□ 0.05
HMGN1P35-201ENST00000303758 SLIT3O75094 1523 aa15.37■□□□□ 0.05
HMGN1P35-201ENST00000303758 CPDO75976 1380 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 THSD7AQ9UPZ6 1657 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 EVA1CP58658 441 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 CCDC125Q86Z20 511 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 SPATA31A5Q5VU36 1347 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 SPATA31A7Q8IWB4 1347 aa15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
HMGN1P35-201ENST00000303758 ONECUT3O60422 494 aaPredicted RBP15.35■□□□□ 0.05
HMGN1P35-201ENST00000303758 GCP02774 474 aa15.35■□□□□ 0.05
HMGN1P35-201ENST00000303758 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
HMGN1P35-201ENST00000303758 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
HMGN1P35-201ENST00000303758 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
HMGN1P35-201ENST00000303758 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
HMGN1P35-201ENST00000303758 TTC21AQ8NDW8 1320 aa15.34■□□□□ 0.05
HMGN1P35-201ENST00000303758 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
HMGN1P35-201ENST00000303758 SSH2Q76I76 1423 aa15.34■□□□□ 0.05
HMGN1P35-201ENST00000303758 USP35Q9P2H5 1018 aa15.33■□□□□ 0.04
HMGN1P35-201ENST00000303758 RGPD1P0DJD0 1748 aa15.33■□□□□ 0.04
HMGN1P35-201ENST00000303758 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
HMGN1P35-201ENST00000303758 TTC21BQ7Z4L5 1316 aa15.33■□□□□ 0.04
HMGN1P35-201ENST00000303758 CPSF1Q10570 1443 aaKnown RBP15.33■□□□□ 0.04
HMGN1P35-201ENST00000303758 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
HMGN1P35-201ENST00000303758 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
HMGN1P35-201ENST00000303758 SOX12O15370 315 aa15.3■□□□□ 0.04
HMGN1P35-201ENST00000303758 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
HMGN1P35-201ENST00000303758 USP54Q70EL1 1684 aa15.3■□□□□ 0.04
HMGN1P35-201ENST00000303758 KCNH5Q8NCM2 988 aa15.3■□□□□ 0.04
HMGN1P35-201ENST00000303758 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
HMGN1P35-201ENST00000303758 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 LTN1O94822 1766 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 COL18A1P39060 1754 aa15.29■□□□□ 0.04
HMGN1P35-201ENST00000303758 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
HMGN1P35-201ENST00000303758 AATKQ6ZMQ8 1374 aa15.28■□□□□ 0.04
HMGN1P35-201ENST00000303758 USP47Q96K76 1375 aa15.28■□□□□ 0.04
HMGN1P35-201ENST00000303758 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
HMGN1P35-201ENST00000303758 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
HMGN1P35-201ENST00000303758 CRB1P82279 1406 aa15.27■□□□□ 0.04
HMGN1P35-201ENST00000303758 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms