RNA–Protein interactions for RNA: ENST00000303577.6

PCBP1-201, Transcript of poly(rC) binding protein 1, humanhuman

APPRIS P1 BASIC

Gene PCBP1, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-201ENST00000303577 PXDNQ92626 1479 aa21.99■■□□□ 1.11
PCBP1-201ENST00000303577 CD163L1Q9NR16 1453 aa21.99■■□□□ 1.11
PCBP1-201ENST00000303577 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
PCBP1-201ENST00000303577 HNRNPUQ00839 825 aaKnown RBP eCLIP21.98■■□□□ 1.11
PCBP1-201ENST00000303577 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
PCBP1-201ENST00000303577 HSPA1LP34931 641 aa21.97■■□□□ 1.11
PCBP1-201ENST00000303577 NPC1L1Q9UHC9 1359 aa21.97■■□□□ 1.11
PCBP1-201ENST00000303577 MON2Q7Z3U7 1717 aa21.96■■□□□ 1.11
PCBP1-201ENST00000303577 TRPM3Q9HCF6 1732 aaPredicted RBP21.96■■□□□ 1.11
PCBP1-201ENST00000303577 NPHP3Q7Z494 1330 aa21.96■■□□□ 1.11
PCBP1-201ENST00000303577 CARD14Q9BXL6 1004 aa21.94■■□□□ 1.1
PCBP1-201ENST00000303577 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
PCBP1-201ENST00000303577 NRKQ7Z2Y5 1582 aa21.94■■□□□ 1.1
PCBP1-201ENST00000303577 PSME1Q06323 249 aa21.94■■□□□ 1.1
PCBP1-201ENST00000303577 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
PCBP1-201ENST00000303577 CPSF1Q10570 1443 aaKnown RBP21.94■■□□□ 1.1
PCBP1-201ENST00000303577 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
PCBP1-201ENST00000303577 SOS2Q07890 1332 aaPredicted RBP21.93■■□□□ 1.1
PCBP1-201ENST00000303577 USP6P35125 1406 aa21.92■■□□□ 1.1
PCBP1-201ENST00000303577 NSD3Q9BZ95 1437 aa21.92■■□□□ 1.1
PCBP1-201ENST00000303577 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
PCBP1-201ENST00000303577 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.1
PCBP1-201ENST00000303577 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.1
PCBP1-201ENST00000303577 ANKRD36BQ8N2N9 1353 aa21.89■■□□□ 1.1
PCBP1-201ENST00000303577 ALS2Q96Q42 1657 aa21.89■■□□□ 1.1
PCBP1-201ENST00000303577 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
PCBP1-201ENST00000303577 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
PCBP1-201ENST00000303577 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
PCBP1-201ENST00000303577 PPP2R1AP30153 589 aa21.87■■□□□ 1.09
PCBP1-201ENST00000303577 TNS3Q68CZ2 1445 aa21.86■■□□□ 1.09
PCBP1-201ENST00000303577 SSH2Q76I76 1423 aa21.86■■□□□ 1.09
PCBP1-201ENST00000303577 PIK3C2AO00443 1686 aa21.86■■□□□ 1.09
PCBP1-201ENST00000303577 PLEKHG5O94827 1062 aa21.86■■□□□ 1.09
PCBP1-201ENST00000303577 LMOD2Q6P5Q4 547 aa21.86■■□□□ 1.09
PCBP1-201ENST00000303577 SPATA31A3Q5VYP0 1347 aa21.85■■□□□ 1.09
PCBP1-201ENST00000303577 SBNO1A3KN83 1393 aa21.85■■□□□ 1.09
PCBP1-201ENST00000303577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCBP1-201ENST00000303577 ZNF692Q9BU19 519 aaPredicted RBP21.84■■□□□ 1.09
PCBP1-201ENST00000303577 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
PCBP1-201ENST00000303577 NUTM2GQ5VZR2 741 aa21.84■■□□□ 1.09
PCBP1-201ENST00000303577 EDC4Q6P2E9 1401 aaKnown RBP21.83■■□□□ 1.09
PCBP1-201ENST00000303577 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.08
PCBP1-201ENST00000303577 LRRC59Q96AG4 307 aaKnown RBP21.82■■□□□ 1.08
PCBP1-201ENST00000303577 CGNL1Q0VF96 1302 aa21.82■■□□□ 1.08
PCBP1-201ENST00000303577 PNPLA6Q8IY17 1366 aa21.82■■□□□ 1.08
PCBP1-201ENST00000303577 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
PCBP1-201ENST00000303577 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
PCBP1-201ENST00000303577 KIF20BQ96Q89 1820 aa21.81■■□□□ 1.08
PCBP1-201ENST00000303577 ABCA3Q99758 1704 aa21.81■■□□□ 1.08
PCBP1-201ENST00000303577 NME9Q86XW9 330 aa21.8■■□□□ 1.08
PCBP1-201ENST00000303577 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
PCBP1-201ENST00000303577 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
PCBP1-201ENST00000303577 COL22A1Q8NFW1 1626 aaPredicted RBP21.79■■□□□ 1.08
PCBP1-201ENST00000303577 NSD2O96028 1365 aa21.79■■□□□ 1.08
PCBP1-201ENST00000303577 JCADQ9P266 1359 aa21.79■■□□□ 1.08
PCBP1-201ENST00000303577 MORC1Q86VD1 984 aa21.78■■□□□ 1.08
PCBP1-201ENST00000303577 ABTB2Q8N961 1025 aa21.78■■□□□ 1.08
PCBP1-201ENST00000303577 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
PCBP1-201ENST00000303577 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
PCBP1-201ENST00000303577 ARHGEF10O15013 1369 aa21.77■■□□□ 1.08
PCBP1-201ENST00000303577 PHRF1Q9P1Y6 1649 aaKnown RBP21.77■■□□□ 1.07
PCBP1-201ENST00000303577 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
PCBP1-201ENST00000303577 NUTM2BA6NNL0 878 aaPredicted RBP21.74■■□□□ 1.07
PCBP1-201ENST00000303577 NUTM2EB1AL46 878 aaPredicted RBP21.74■■□□□ 1.07
PCBP1-201ENST00000303577 NUTM2AQ8IVF1 878 aaPredicted RBP21.74■■□□□ 1.07
PCBP1-201ENST00000303577 USP54Q70EL1 1684 aa21.73■■□□□ 1.07
PCBP1-201ENST00000303577 NLRP6P59044 892 aa21.73■■□□□ 1.07
PCBP1-201ENST00000303577 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
PCBP1-201ENST00000303577 INSRP06213 1382 aa21.73■■□□□ 1.07
PCBP1-201ENST00000303577 LRP6O75581 1613 aa21.73■■□□□ 1.07
PCBP1-201ENST00000303577 FYB1O15117 783 aa21.71■■□□□ 1.07
PCBP1-201ENST00000303577 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
PCBP1-201ENST00000303577 ANKRD26Q9UPS8 1709 aa21.7■■□□□ 1.07
PCBP1-201ENST00000303577 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.06
PCBP1-201ENST00000303577 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.06
PCBP1-201ENST00000303577 SOX12O15370 315 aa21.7■■□□□ 1.06
PCBP1-201ENST00000303577 BLMP54132 1417 aaPredicted RBP21.7■■□□□ 1.06
PCBP1-201ENST00000303577 TNNT2P45379 298 aaPredicted RBP21.69■■□□□ 1.06
PCBP1-201ENST00000303577 USP19O94966 1318 aa21.69■■□□□ 1.06
PCBP1-201ENST00000303577 SLIT3O75094 1523 aa21.69■■□□□ 1.06
PCBP1-201ENST00000303577 USP31Q70CQ4 1352 aa21.68■■□□□ 1.06
PCBP1-201ENST00000303577 HAP1P54257 671 aaPredicted RBP21.67■■□□□ 1.06
PCBP1-201ENST00000303577 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
PCBP1-201ENST00000303577 SPATA31A6Q5VVP1 1343 aa21.66■■□□□ 1.06
PCBP1-201ENST00000303577 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
PCBP1-201ENST00000303577 NFAT5O94916 1531 aa21.65■■□□□ 1.06
PCBP1-201ENST00000303577 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
PCBP1-201ENST00000303577 COG3Q96JB2 828 aa21.64■■□□□ 1.06
PCBP1-201ENST00000303577 FBLN1P23142 703 aa21.64■■□□□ 1.05
PCBP1-201ENST00000303577 GCP02774 474 aa21.63■■□□□ 1.05
PCBP1-201ENST00000303577 ZC3H6P61129 1189 aaKnown RBP21.62■■□□□ 1.05
PCBP1-201ENST00000303577 LTN1O94822 1766 aa21.62■■□□□ 1.05
PCBP1-201ENST00000303577 ZBTB7CA1YPR0 619 aa21.61■■□□□ 1.05
PCBP1-201ENST00000303577 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
PCBP1-201ENST00000303577 MTHFSP49914 203 aa21.6■■□□□ 1.05
PCBP1-201ENST00000303577 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
PCBP1-201ENST00000303577 PLCH1Q4KWH8 1693 aa21.59■■□□□ 1.05
PCBP1-201ENST00000303577 SMG6Q86US8 1419 aaKnown RBP21.58■■□□□ 1.05
PCBP1-201ENST00000303577 CHRNA2Q15822 529 aa21.58■■□□□ 1.04
PCBP1-201ENST00000303577 MEX3CQ5U5Q3 659 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms