RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
TPM3-202ENST00000302206 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
TPM3-202ENST00000302206 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
TPM3-202ENST00000302206 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
TPM3-202ENST00000302206 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
TPM3-202ENST00000302206 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
TPM3-202ENST00000302206 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
TPM3-202ENST00000302206 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
TPM3-202ENST00000302206 FYB1O15117 783 aa15.97■□□□□ 0.15
TPM3-202ENST00000302206 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
TPM3-202ENST00000302206 SHPRHQ149N8 1683 aa15.96■□□□□ 0.15
TPM3-202ENST00000302206 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
TPM3-202ENST00000302206 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
TPM3-202ENST00000302206 JCADQ9P266 1359 aa15.96■□□□□ 0.15
TPM3-202ENST00000302206 ITSN1Q15811 1721 aa15.96■□□□□ 0.15
TPM3-202ENST00000302206 PROSER2Q86WR7 435 aaPredicted RBP15.95■□□□□ 0.14
TPM3-202ENST00000302206 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
TPM3-202ENST00000302206 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
TPM3-202ENST00000302206 PLEKHG3A1L390 1219 aa15.94■□□□□ 0.14
TPM3-202ENST00000302206 ERICH6BQ5W0A0 696 aa15.94■□□□□ 0.14
TPM3-202ENST00000302206 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
TPM3-202ENST00000302206 KCNA6P17658 529 aa15.93■□□□□ 0.14
TPM3-202ENST00000302206 MTHFSP49914 203 aa15.93■□□□□ 0.14
TPM3-202ENST00000302206 MSH6P52701 1360 aa15.92■□□□□ 0.14
TPM3-202ENST00000302206 GGNBP2Q9H3C7 697 aa15.92■□□□□ 0.14
TPM3-202ENST00000302206 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
TPM3-202ENST00000302206 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
TPM3-202ENST00000302206 FKBP8Q14318 412 aa15.91■□□□□ 0.14
TPM3-202ENST00000302206 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
TPM3-202ENST00000302206 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
TPM3-202ENST00000302206 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
TPM3-202ENST00000302206 NRKQ7Z2Y5 1582 aa15.9■□□□□ 0.14
TPM3-202ENST00000302206 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
TPM3-202ENST00000302206 COL3A1P02461 1466 aaPredicted RBP15.9■□□□□ 0.14
TPM3-202ENST00000302206 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
TPM3-202ENST00000302206 ZNF521Q96K83 1311 aa15.89■□□□□ 0.13
TPM3-202ENST00000302206 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
TPM3-202ENST00000302206 PNPLA6Q8IY17 1366 aa15.88■□□□□ 0.13
TPM3-202ENST00000302206 FMN2Q9NZ56 1722 aa15.88■□□□□ 0.13
TPM3-202ENST00000302206 NWD1Q149M9 1564 aa15.88■□□□□ 0.13
TPM3-202ENST00000302206 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
TPM3-202ENST00000302206 COL16A1Q07092 1604 aaPredicted RBP15.87■□□□□ 0.13
TPM3-202ENST00000302206 SPATA31A6Q5VVP1 1343 aa15.87■□□□□ 0.13
TPM3-202ENST00000302206 USP6P35125 1406 aa15.85■□□□□ 0.13
TPM3-202ENST00000302206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
TPM3-202ENST00000302206 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
TPM3-202ENST00000302206 LRP6O75581 1613 aa15.85■□□□□ 0.13
TPM3-202ENST00000302206 ACEP12821 1306 aa15.85■□□□□ 0.13
TPM3-202ENST00000302206 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
TPM3-202ENST00000302206 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
TPM3-202ENST00000302206 NALCNQ8IZF0 1738 aa15.83■□□□□ 0.13
TPM3-202ENST00000302206 RXRBP28702 533 aa15.83■□□□□ 0.12
TPM3-202ENST00000302206 COG3Q96JB2 828 aa15.83■□□□□ 0.12
TPM3-202ENST00000302206 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.12
TPM3-202ENST00000302206 APAF1O14727 1248 aa15.82■□□□□ 0.12
TPM3-202ENST00000302206 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
TPM3-202ENST00000302206 NME9Q86XW9 330 aa15.82■□□□□ 0.12
TPM3-202ENST00000302206 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
TPM3-202ENST00000302206 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
TPM3-202ENST00000302206 ADGRL3Q9HAR2 1447 aa15.82■□□□□ 0.12
TPM3-202ENST00000302206 CDK12Q9NYV4 1490 aaPredicted RBP15.82■□□□□ 0.12
TPM3-202ENST00000302206 OVOS2A0A0J9YW53 1432 aa15.81■□□□□ 0.12
TPM3-202ENST00000302206 OVOS2Q6IE36 1432 aa15.81■□□□□ 0.12
TPM3-202ENST00000302206 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
TPM3-202ENST00000302206 DIAPH1O60610 1272 aaKnown RBP15.8■□□□□ 0.12
TPM3-202ENST00000302206 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
TPM3-202ENST00000302206 TRMT2AQ8IZ69 625 aaKnown RBP15.8■□□□□ 0.12
TPM3-202ENST00000302206 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
TPM3-202ENST00000302206 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
TPM3-202ENST00000302206 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
TPM3-202ENST00000302206 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
TPM3-202ENST00000302206 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
TPM3-202ENST00000302206 MAP2P11137 1827 aaKnown RBP15.79■□□□□ 0.12
TPM3-202ENST00000302206 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
TPM3-202ENST00000302206 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
TPM3-202ENST00000302206 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
TPM3-202ENST00000302206 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.127e-10■■□□□ 13
TPM3-202ENST00000302206 SLFN5Q08AF3 891 aa15.78■□□□□ 0.12
TPM3-202ENST00000302206 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
TPM3-202ENST00000302206 USP54Q70EL1 1684 aa15.78■□□□□ 0.12
TPM3-202ENST00000302206 E9PSI1 815 aa15.77■□□□□ 0.12
TPM3-202ENST00000302206 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.12
TPM3-202ENST00000302206 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
TPM3-202ENST00000302206 WDR63Q8IWG1 891 aa15.76■□□□□ 0.11
TPM3-202ENST00000302206 TCP11L2Q8N4U5 519 aa15.76■□□□□ 0.11
TPM3-202ENST00000302206 NGDNQ8NEJ9 315 aaKnown RBP15.76■□□□□ 0.11
TPM3-202ENST00000302206 NCOA3Q9Y6Q9 1424 aa15.76■□□□□ 0.11
TPM3-202ENST00000302206 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
TPM3-202ENST00000302206 WWC1Q8IX03 1113 aa15.75■□□□□ 0.11
TPM3-202ENST00000302206 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
TPM3-202ENST00000302206 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
TPM3-202ENST00000302206 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
TPM3-202ENST00000302206 FCHSD2O94868 740 aa15.74■□□□□ 0.11
TPM3-202ENST00000302206 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
TPM3-202ENST00000302206 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
TPM3-202ENST00000302206 NUTM2BA6NNL0 878 aaPredicted RBP15.73■□□□□ 0.11
TPM3-202ENST00000302206 NUTM2EB1AL46 878 aaPredicted RBP15.73■□□□□ 0.11
TPM3-202ENST00000302206 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
TPM3-202ENST00000302206 RRP1P56182 461 aaKnown RBP15.73■□□□□ 0.11
TPM3-202ENST00000302206 NUTM2AQ8IVF1 878 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms