RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ONECUT3O60422 494 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-202ENST00000301935 HIRIP3Q9BW71 556 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-202ENST00000301935 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
UBXN1-202ENST00000301935 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
UBXN1-202ENST00000301935 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
UBXN1-202ENST00000301935 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
UBXN1-202ENST00000301935 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
UBXN1-202ENST00000301935 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
UBXN1-202ENST00000301935 GPRASP1Q5JY77 1395 aa21.45■■□□□ 1.02
UBXN1-202ENST00000301935 SF3B2Q13435 895 aaKnown RBP21.44■■□□□ 1.02
UBXN1-202ENST00000301935 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
UBXN1-202ENST00000301935 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-202ENST00000301935 ATP7BP35670 1465 aa21.41■■□□□ 1.02
UBXN1-202ENST00000301935 WASLO00401 505 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-202ENST00000301935 BTG4Q9NY30 223 aa21.41■■□□□ 1.02
UBXN1-202ENST00000301935 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
UBXN1-202ENST00000301935 LRP5O75197 1615 aa21.4■■□□□ 1.02
UBXN1-202ENST00000301935 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
UBXN1-202ENST00000301935 RGPD1P0DJD0 1748 aa21.4■■□□□ 1.02
UBXN1-202ENST00000301935 A0A0G2JS52 829 aa21.39■■□□□ 1.01
UBXN1-202ENST00000301935 MYT1Q01538 1121 aa21.39■■□□□ 1.01
UBXN1-202ENST00000301935 FAM98CQ17RN3 349 aaKnown RBP21.38■■□□□ 1.01
UBXN1-202ENST00000301935 TOPAZ1Q8N9V7 1692 aa21.37■■□□□ 1.01
UBXN1-202ENST00000301935 NGDNQ8NEJ9 315 aaKnown RBP21.36■■□□□ 1.01
UBXN1-202ENST00000301935 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
UBXN1-202ENST00000301935 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
UBXN1-202ENST00000301935 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
UBXN1-202ENST00000301935 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
UBXN1-202ENST00000301935 KIAA1210Q9ULL0 1709 aa21.34■■□□□ 1.01
UBXN1-202ENST00000301935 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
UBXN1-202ENST00000301935 BAG6P46379 1132 aa21.33■■□□□ 1.01
UBXN1-202ENST00000301935 PRDM11Q9NQV5 511 aa21.32■■□□□ 1
UBXN1-202ENST00000301935 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
UBXN1-202ENST00000301935 KIAA0232Q92628 1395 aa21.3■■□□□ 1
UBXN1-202ENST00000301935 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
UBXN1-202ENST00000301935 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
UBXN1-202ENST00000301935 DISP2A7MBM2 1401 aa21.28■■□□□ 1
UBXN1-202ENST00000301935 TRPM1Q7Z4N2 1603 aa21.27■■□□□ 1
UBXN1-202ENST00000301935 ROCK2O75116 1388 aaKnown RBP21.26■□□□□ 0.99
UBXN1-202ENST00000301935 FAM182BQ5T319 152 aa21.26■□□□□ 0.99
UBXN1-202ENST00000301935 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
UBXN1-202ENST00000301935 PSDA5PKW4 1024 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-202ENST00000301935 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
UBXN1-202ENST00000301935 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
UBXN1-202ENST00000301935 CHRNA2Q15822 529 aa21.24■□□□□ 0.99
UBXN1-202ENST00000301935 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
UBXN1-202ENST00000301935 LMO7Q8WWI1 1683 aa21.24■□□□□ 0.99
UBXN1-202ENST00000301935 ACEP12821 1306 aa21.23■□□□□ 0.99
UBXN1-202ENST00000301935 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
UBXN1-202ENST00000301935 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
UBXN1-202ENST00000301935 NUTM2GQ5VZR2 741 aa21.21■□□□□ 0.99
UBXN1-202ENST00000301935 STRN4Q9NRL3 753 aa21.21■□□□□ 0.99
UBXN1-202ENST00000301935 CCDC61Q9Y6R9 512 aa21.21■□□□□ 0.99
UBXN1-202ENST00000301935 ZC3H6P61129 1189 aaKnown RBP21.2■□□□□ 0.98
UBXN1-202ENST00000301935 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
UBXN1-202ENST00000301935 RREB1Q92766 1687 aa21.19■□□□□ 0.98
UBXN1-202ENST00000301935 CAMTA1Q9Y6Y1 1673 aa21.19■□□□□ 0.98
UBXN1-202ENST00000301935 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
UBXN1-202ENST00000301935 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
UBXN1-202ENST00000301935 USP19O94966 1318 aa21.18■□□□□ 0.98
UBXN1-202ENST00000301935 CPDO75976 1380 aa21.18■□□□□ 0.98
UBXN1-202ENST00000301935 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
UBXN1-202ENST00000301935 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
UBXN1-202ENST00000301935 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
UBXN1-202ENST00000301935 EZH2Q15910 746 aaKnown RBP21.16■□□□□ 0.98
UBXN1-202ENST00000301935 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
UBXN1-202ENST00000301935 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
UBXN1-202ENST00000301935 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
UBXN1-202ENST00000301935 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
UBXN1-202ENST00000301935 TRIM37O94972 964 aa21.15■□□□□ 0.98
UBXN1-202ENST00000301935 R3HDM1Q15032 1099 aaKnown RBP21.15■□□□□ 0.98
UBXN1-202ENST00000301935 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
UBXN1-202ENST00000301935 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
UBXN1-202ENST00000301935 USP47Q96K76 1375 aa21.13■□□□□ 0.97
UBXN1-202ENST00000301935 EVA1CP58658 441 aa21.13■□□□□ 0.97
UBXN1-202ENST00000301935 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
UBXN1-202ENST00000301935 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
UBXN1-202ENST00000301935 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
UBXN1-202ENST00000301935 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
UBXN1-202ENST00000301935 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
UBXN1-202ENST00000301935 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-202ENST00000301935 SLIT3O75094 1523 aa21.1■□□□□ 0.97
UBXN1-202ENST00000301935 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
UBXN1-202ENST00000301935 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
UBXN1-202ENST00000301935 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
UBXN1-202ENST00000301935 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
UBXN1-202ENST00000301935 APBA3O96018 575 aa21.09■□□□□ 0.97
UBXN1-202ENST00000301935 USP6P35125 1406 aa21.09■□□□□ 0.97
UBXN1-202ENST00000301935 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
UBXN1-202ENST00000301935 LRRC37A3O60309 1634 aa21.08■□□□□ 0.97
UBXN1-202ENST00000301935 GCP02774 474 aa21.08■□□□□ 0.97
UBXN1-202ENST00000301935 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
UBXN1-202ENST00000301935 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
UBXN1-202ENST00000301935 WNK3Q9BYP7 1800 aa21.08■□□□□ 0.96
UBXN1-202ENST00000301935 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
UBXN1-202ENST00000301935 CRB1P82279 1406 aa21.07■□□□□ 0.96
UBXN1-202ENST00000301935 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-202ENST00000301935 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
UBXN1-202ENST00000301935 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
UBXN1-202ENST00000301935 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms