RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
GCN1-201ENST00000300648 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
GCN1-201ENST00000300648 SEPT7Q16181 437 aaKnown RBP13.43□□□□□ -0.26
GCN1-201ENST00000300648 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
GCN1-201ENST00000300648 MLECQ14165 292 aa13.43□□□□□ -0.26
GCN1-201ENST00000300648 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
GCN1-201ENST00000300648 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 PDILTQ8N807 584 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 CUL7Q14999 1698 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 DAPK1P53355 1430 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 GNAI3P08754 354 aa13.42□□□□□ -0.26
GCN1-201ENST00000300648 SMC2O95347 1197 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 PDE3AQ14432 1141 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 FOXD1Q16676 465 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
GCN1-201ENST00000300648 KANK4Q5T7N3 995 aaPredicted RBP13.41□□□□□ -0.26
GCN1-201ENST00000300648 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
GCN1-201ENST00000300648 GBP2P32456 591 aaPredicted RBP13.4□□□□□ -0.26
GCN1-201ENST00000300648 PLEKHH1Q9ULM0 1364 aa13.4□□□□□ -0.26
GCN1-201ENST00000300648 DESP17661 470 aa13.4□□□□□ -0.26
GCN1-201ENST00000300648 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.27
GCN1-201ENST00000300648 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.27
GCN1-201ENST00000300648 SRCIN1Q9C0H9 1055 aa13.4□□□□□ -0.27
GCN1-201ENST00000300648 CFAP45Q9UL16 551 aa13.4□□□□□ -0.27
GCN1-201ENST00000300648 CDKL5O76039 1030 aa13.39□□□□□ -0.27
GCN1-201ENST00000300648 GOLGA6L10A0A0M3HER8 536 aa13.39□□□□□ -0.27
GCN1-201ENST00000300648 CCDC181Q5TID7 509 aa13.39□□□□□ -0.27
GCN1-201ENST00000300648 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
GCN1-201ENST00000300648 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
GCN1-201ENST00000300648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.271e-7■■□□□ 11.5
GCN1-201ENST00000300648 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
GCN1-201ENST00000300648 LRRC9Q6ZRR7 1453 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 KRT85P78386 507 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
GCN1-201ENST00000300648 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
GCN1-201ENST00000300648 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
GCN1-201ENST00000300648 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
GCN1-201ENST00000300648 FEZ1Q99689 392 aa13.37□□□□□ -0.27
GCN1-201ENST00000300648 ZNF428Q96B54 188 aa13.37□□□□□ -0.27
GCN1-201ENST00000300648 RIPK4P57078 832 aa13.37□□□□□ -0.27
GCN1-201ENST00000300648 CLASRPQ8N2M8 674 aaKnown RBP13.37□□□□□ -0.27
GCN1-201ENST00000300648 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 MICALCLQ6ZW33 695 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
GCN1-201ENST00000300648 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
GCN1-201ENST00000300648 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 CCDC91Q7Z6B0 441 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 MCM5P33992 734 aa13.36□□□□□ -0.27
GCN1-201ENST00000300648 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.27
GCN1-201ENST00000300648 TRIM22Q8IYM9 498 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
GCN1-201ENST00000300648 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■■■■□ 24.8
GCN1-201ENST00000300648 TNMDQ9H2S6 317 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 ANKRD50Q9ULJ7 1429 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 GIMAP7Q8NHV1 300 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 SERPINC1P01008 464 aa13.35□□□□□ -0.27
GCN1-201ENST00000300648 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
GCN1-201ENST00000300648 STK38Q15208 465 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
GCN1-201ENST00000300648 PLIN1O60240 522 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 NEMFO60524 1076 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 CAVIN2O95810 425 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.273e-8■■■■■ 37.2
GCN1-201ENST00000300648 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 UQCRHLA0A096LP55 91 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 ZSCAN12O43309 604 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 UQCRHP07919 91 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 APAF1O14727 1248 aa13.34□□□□□ -0.27
GCN1-201ENST00000300648 ESPNB1AK53 854 aa13.33□□□□□ -0.27
GCN1-201ENST00000300648 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.27
GCN1-201ENST00000300648 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
GCN1-201ENST00000300648 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
GCN1-201ENST00000300648 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
GCN1-201ENST00000300648 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
GCN1-201ENST00000300648 KRT32Q14532 448 aa13.33□□□□□ -0.28
GCN1-201ENST00000300648 K7ELQ4 463 aaPredicted RBP13.32□□□□□ -0.28
GCN1-201ENST00000300648 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 NF2P35240 595 aa13.32□□□□□ -0.28
GCN1-201ENST00000300648 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms