RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MYL6BP14649 208 aa16.27■□□□□ 0.19
CHRFAM7A-201ENST00000299847 PSMA5P28066 241 aa16.27■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.19
CHRFAM7A-201ENST00000299847 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
CHRFAM7A-201ENST00000299847 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
CHRFAM7A-201ENST00000299847 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
CHRFAM7A-201ENST00000299847 TSPY26PQ9H489 355 aa16.25■□□□□ 0.19
CHRFAM7A-201ENST00000299847 ARGLU1Q9NWB6 273 aaPredicted RBP16.25■□□□□ 0.19
CHRFAM7A-201ENST00000299847 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
CHRFAM7A-201ENST00000299847 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
CHRFAM7A-201ENST00000299847 XBP1P17861 261 aa16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 CDK5RAP3Q96JB5 506 aa16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
CHRFAM7A-201ENST00000299847 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 PRAM1Q96QH2 718 aa16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 NUTM2BA6NNL0 878 aaPredicted RBP16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 NUTM2EB1AL46 878 aaPredicted RBP16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 AKNAQ7Z591 1439 aa16.23■□□□□ 0.19
CHRFAM7A-201ENST00000299847 ZHX3Q9H4I2 956 aa16.22■□□□□ 0.19
CHRFAM7A-201ENST00000299847 KRT18P05783 430 aaKnown RBP16.22■□□□□ 0.19
CHRFAM7A-201ENST00000299847 HSP90B2PQ58FF3 399 aa16.22■□□□□ 0.19
CHRFAM7A-201ENST00000299847 NBPF1Q3BBV0 1214 aa16.22■□□□□ 0.19
CHRFAM7A-201ENST00000299847 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
CHRFAM7A-201ENST00000299847 KINO60870 393 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-201ENST00000299847 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-201ENST00000299847 MYOM3Q5VTT5 1437 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 NUP133Q8WUM0 1156 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 MAGEC2Q9UBF1 373 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 FGD6Q6ZV73 1430 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 MRE11P49959 708 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 STK38Q15208 465 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 MAP7D2Q96T17 732 aa16.2■□□□□ 0.18
CHRFAM7A-201ENST00000299847 GNAI2P04899 355 aa16.19■□□□□ 0.18
CHRFAM7A-201ENST00000299847 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
CHRFAM7A-201ENST00000299847 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
CHRFAM7A-201ENST00000299847 ACBD3Q9H3P7 528 aa16.18■□□□□ 0.18
CHRFAM7A-201ENST00000299847 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
CHRFAM7A-201ENST00000299847 IL27Q8NEV9 243 aa16.18■□□□□ 0.18
CHRFAM7A-201ENST00000299847 GNAI3P08754 354 aa16.18■□□□□ 0.18
CHRFAM7A-201ENST00000299847 SLC12A5Q9H2X9 1139 aa16.18■□□□□ 0.18
CHRFAM7A-201ENST00000299847 SERPINC1P01008 464 aa16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 FKBP4Q02790 459 aaKnown RBP eCLIP16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CDR1P51861 262 aa16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 RBM5P52756 815 aaKnown RBP eCLIP16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CABP4P57796 275 aa16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
CHRFAM7A-201ENST00000299847 IBSPP21815 317 aaPredicted RBP16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CCDC173Q0VFZ6 552 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CDK19Q9BWU1 502 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 GPRASP1Q5JY77 1395 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 H0YHG0 523 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 PLCD4Q9BRC7 762 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
CHRFAM7A-201ENST00000299847 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 FILIP1LQ4L180 1135 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 ME1P48163 572 aa16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 AXDND1Q5T1B0 1012 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-201ENST00000299847 CCDC69A6NI79 296 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 SYCP1Q15431 976 aa16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 PROSER2Q86WR7 435 aaPredicted RBP16.14■□□□□ 0.17
CHRFAM7A-201ENST00000299847 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 AACSQ86V21 672 aa16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 CYP46A1Q9Y6A2 500 aa16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 TXLNAP40222 546 aa16.13■□□□□ 0.17
CHRFAM7A-201ENST00000299847 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms