RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 KDM6BO15054 1643 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 KIAA1211Q6ZU35 1233 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-201ENST00000299267 ADGRL2O95490 1459 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
GABRB3-201ENST00000299267 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
GABRB3-201ENST00000299267 MYL6BP14649 208 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
GABRB3-201ENST00000299267 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
GABRB3-201ENST00000299267 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 NPATQ14207 1427 aa12.69□□□□□ -0.38
GABRB3-201ENST00000299267 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
GABRB3-201ENST00000299267 ARHGEF12Q9NZN5 1544 aa12.68□□□□□ -0.38
GABRB3-201ENST00000299267 CABP4P57796 275 aa12.68□□□□□ -0.38
GABRB3-201ENST00000299267 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
GABRB3-201ENST00000299267 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
GABRB3-201ENST00000299267 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
GABRB3-201ENST00000299267 PDE4AP27815 886 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
GABRB3-201ENST00000299267 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
GABRB3-201ENST00000299267 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
GABRB3-201ENST00000299267 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
GABRB3-201ENST00000299267 SAMD9LQ8IVG5 1584 aa12.66□□□□□ -0.38
GABRB3-201ENST00000299267 SMG6Q86US8 1419 aaKnown RBP12.66□□□□□ -0.38
GABRB3-201ENST00000299267 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
GABRB3-201ENST00000299267 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
GABRB3-201ENST00000299267 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.38
GABRB3-201ENST00000299267 PER1O15534 1290 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-201ENST00000299267 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
GABRB3-201ENST00000299267 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
GABRB3-201ENST00000299267 ANP32BQ92688 251 aaKnown RBP12.65□□□□□ -0.38
GABRB3-201ENST00000299267 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 NEO1Q92859 1461 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-201ENST00000299267 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 ZCCHC11Q5TAX3 1644 aaKnown RBP12.64□□□□□ -0.39
GABRB3-201ENST00000299267 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 MCCP23508 829 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
GABRB3-201ENST00000299267 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
GABRB3-201ENST00000299267 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
GABRB3-201ENST00000299267 YTHDC2Q9H6S0 1430 aaKnown RBP12.63□□□□□ -0.39
GABRB3-201ENST00000299267 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
GABRB3-201ENST00000299267 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 GPATCH3Q96I76 525 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 NGLY1Q96IV0 654 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 GOLGA6L22H0YM25 854 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
GABRB3-201ENST00000299267 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
GABRB3-201ENST00000299267 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
GABRB3-201ENST00000299267 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
GABRB3-201ENST00000299267 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
GABRB3-201ENST00000299267 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
GABRB3-201ENST00000299267 ANXA1P04083 346 aa12.61□□□□□ -0.39
GABRB3-201ENST00000299267 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-201ENST00000299267 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 F6X3S4 739 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
GABRB3-201ENST00000299267 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 PLEKHH1Q9ULM0 1364 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 G3V3G9 751 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 IFIT2P09913 472 aaKnown RBP12.6□□□□□ -0.39
GABRB3-201ENST00000299267 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
GABRB3-201ENST00000299267 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-201ENST00000299267 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
GABRB3-201ENST00000299267 MSH6P52701 1360 aa12.59□□□□□ -0.39
GABRB3-201ENST00000299267 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
GABRB3-201ENST00000299267 FOXD4L5Q5VV16 416 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-201ENST00000299267 FOXD4L4Q8WXT5 416 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-201ENST00000299267 SIL1Q9H173 461 aa12.59□□□□□ -0.39
GABRB3-201ENST00000299267 TMX4Q9H1E5 349 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-201ENST00000299267 DMRT2Q9Y5R5 561 aa12.59□□□□□ -0.39
GABRB3-201ENST00000299267 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.39
GABRB3-201ENST00000299267 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.39
GABRB3-201ENST00000299267 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
GABRB3-201ENST00000299267 ZFYVE16Q7Z3T8 1539 aa12.58□□□□□ -0.4
GABRB3-201ENST00000299267 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
GABRB3-201ENST00000299267 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
GABRB3-201ENST00000299267 EIF5BO60841 1220 aaKnown RBP12.57□□□□□ -0.4
GABRB3-201ENST00000299267 TMEM2Q9UHN6 1383 aa12.57□□□□□ -0.4
GABRB3-201ENST00000299267 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
GABRB3-201ENST00000299267 GCP02774 474 aa12.57□□□□□ -0.4
GABRB3-201ENST00000299267 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
GABRB3-201ENST00000299267 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-201ENST00000299267 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms