RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 CD163L1Q9NR16 1453 aa25.85■■□□□ 1.73
HPS6-201ENST00000299238 MLECQ14165 292 aa25.84■■□□□ 1.73
HPS6-201ENST00000299238 TCP11L2Q8N4U5 519 aa25.84■■□□□ 1.73
HPS6-201ENST00000299238 RIMS2Q9UQ26 1411 aa25.83■■□□□ 1.73
HPS6-201ENST00000299238 PDE3AQ14432 1141 aa25.83■■□□□ 1.72
HPS6-201ENST00000299238 DLC1Q96QB1 1528 aa25.82■■□□□ 1.72
HPS6-201ENST00000299238 RRP9O43818 475 aaKnown RBP25.82■■□□□ 1.72
HPS6-201ENST00000299238 HSP90AA1P07900 732 aaKnown RBP25.81■■□□□ 1.72
HPS6-201ENST00000299238 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
HPS6-201ENST00000299238 NLRP1Q9C000 1473 aa25.8■■□□□ 1.72
HPS6-201ENST00000299238 ADGRB2O60241 1585 aa25.8■■□□□ 1.72
HPS6-201ENST00000299238 KIF20BQ96Q89 1820 aa25.8■■□□□ 1.72
HPS6-201ENST00000299238 MED14O60244 1454 aa25.8■■□□□ 1.72
HPS6-201ENST00000299238 PANK1Q8TE04 598 aa25.79■■□□□ 1.72
HPS6-201ENST00000299238 GGNBP2Q9H3C7 697 aa25.79■■□□□ 1.72
HPS6-201ENST00000299238 C8orf34Q49A92 452 aa25.78■■□□□ 1.72
HPS6-201ENST00000299238 CANXP27824 592 aaKnown RBP25.78■■□□□ 1.72
HPS6-201ENST00000299238 CCDC27Q2M243 656 aa25.78■■□□□ 1.72
HPS6-201ENST00000299238 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
HPS6-201ENST00000299238 NRXN3Q9Y4C0 1643 aa25.77■■□□□ 1.72
HPS6-201ENST00000299238 CDK19Q9BWU1 502 aa25.77■■□□□ 1.72
HPS6-201ENST00000299238 COG6Q9Y2V7 657 aa25.77■■□□□ 1.72
HPS6-201ENST00000299238 COL3A1P02461 1466 aaPredicted RBP25.77■■□□□ 1.72
HPS6-201ENST00000299238 FAM161AQ3B820 660 aa25.77■■□□□ 1.72
HPS6-201ENST00000299238 ARXQ96QS3 562 aa25.77■■□□□ 1.72
HPS6-201ENST00000299238 IGHDP01880 384 aa25.76■■□□□ 1.71
HPS6-201ENST00000299238 U2AF1L5P0DN76 240 aaPredicted RBP25.76■■□□□ 1.71
HPS6-201ENST00000299238 U2AF1Q01081 240 aaKnown RBP eCLIP25.76■■□□□ 1.71
HPS6-201ENST00000299238 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
HPS6-201ENST00000299238 FYB1O15117 783 aa25.74■■□□□ 1.71
HPS6-201ENST00000299238 PNNQ9H307 717 aaKnown RBP25.74■■□□□ 1.71
HPS6-201ENST00000299238 NCBP3Q53F19 620 aaKnown RBP25.74■■□□□ 1.71
HPS6-201ENST00000299238 BCL2L13Q9BXK5 485 aa25.74■■□□□ 1.71
HPS6-201ENST00000299238 HDGFL2Q7Z4V5 671 aaPredicted RBP25.73■■□□□ 1.71
HPS6-201ENST00000299238 CLUAP1Q96AJ1 413 aa25.72■■□□□ 1.71
HPS6-201ENST00000299238 TNNQ9UQP3 1299 aa25.71■■□□□ 1.71
HPS6-201ENST00000299238 CABP1Q9NZU7 370 aa25.71■■□□□ 1.71
HPS6-201ENST00000299238 A0A0U1RQG5 324 aaPredicted RBP25.7■■□□□ 1.71
HPS6-201ENST00000299238 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.71
HPS6-201ENST00000299238 ZMYM3Q14202 1370 aa25.69■■□□□ 1.7
HPS6-201ENST00000299238 ATP7BP35670 1465 aa25.69■■□□□ 1.7
HPS6-201ENST00000299238 ESF1Q9H501 851 aaKnown RBP25.67■■□□□ 1.7
HPS6-201ENST00000299238 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
HPS6-201ENST00000299238 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
HPS6-201ENST00000299238 VIRMAQ69YN4 1812 aaKnown RBP25.65■■□□□ 1.7
HPS6-201ENST00000299238 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.65■■□□□ 1.7
HPS6-201ENST00000299238 RLBP1P12271 317 aa25.64■■□□□ 1.7
HPS6-201ENST00000299238 METP08581 1390 aa25.64■■□□□ 1.7
HPS6-201ENST00000299238 MYH16Q9H6N6 1097 aa25.64■■□□□ 1.69
HPS6-201ENST00000299238 PLEKHF1Q96S99 279 aa25.63■■□□□ 1.69
HPS6-201ENST00000299238 AAMPQ13685 434 aa25.61■■□□□ 1.69
HPS6-201ENST00000299238 UBR1Q8IWV7 1749 aa25.61■■□□□ 1.69
HPS6-201ENST00000299238 PNPLA6Q8IY17 1366 aa25.61■■□□□ 1.69
HPS6-201ENST00000299238 TNRQ92752 1358 aa25.61■■□□□ 1.69
HPS6-201ENST00000299238 CLCN1P35523 988 aa25.61■■□□□ 1.69
HPS6-201ENST00000299238 CDC42BPGQ6DT37 1551 aa25.59■■□□□ 1.69
HPS6-201ENST00000299238 RBM10P98175 930 aaKnown RBP25.59■■□□□ 1.69
HPS6-201ENST00000299238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.59■■□□□ 1.69
HPS6-201ENST00000299238 MAPK8IP3Q9UPT6 1336 aa25.59■■□□□ 1.69
HPS6-201ENST00000299238 CPS1P31327 1500 aa25.58■■□□□ 1.69
HPS6-201ENST00000299238 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.69
HPS6-201ENST00000299238 TMPOP42166 694 aaKnown RBP25.58■■□□□ 1.69
HPS6-201ENST00000299238 PANK2Q9BZ23 570 aa25.58■■□□□ 1.69
HPS6-201ENST00000299238 PPIP5K1Q6PFW1 1433 aa25.58■■□□□ 1.68
HPS6-201ENST00000299238 PCDHB15Q9Y5E8 787 aa25.57■■□□□ 1.68
HPS6-201ENST00000299238 TECPR2O15040 1411 aa25.57■■□□□ 1.68
HPS6-201ENST00000299238 WASLO00401 505 aaPredicted RBP25.57■■□□□ 1.68
HPS6-201ENST00000299238 L1TD1Q5T7N2 865 aaKnown RBP25.56■■□□□ 1.68
HPS6-201ENST00000299238 TSR2Q969E8 191 aaKnown RBP25.56■■□□□ 1.68
HPS6-201ENST00000299238 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
HPS6-201ENST00000299238 XRCC6P12956 609 aaKnown RBP eCLIP25.56■■□□□ 1.68
HPS6-201ENST00000299238 CPSF1Q10570 1443 aaKnown RBP25.56■■□□□ 1.68
HPS6-201ENST00000299238 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
HPS6-201ENST00000299238 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
HPS6-201ENST00000299238 TXNDC2Q86VQ3 553 aa25.55■■□□□ 1.68
HPS6-201ENST00000299238 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
HPS6-201ENST00000299238 SEC24BO95487 1268 aa25.55■■□□□ 1.68
HPS6-201ENST00000299238 PMFBP1Q8TBY8 1022 aa25.55■■□□□ 1.68
HPS6-201ENST00000299238 EDC4Q6P2E9 1401 aaKnown RBP25.55■■□□□ 1.68
HPS6-201ENST00000299238 MON2Q7Z3U7 1717 aa25.54■■□□□ 1.68
HPS6-201ENST00000299238 CT47B1P0C2W7 299 aaPredicted RBP25.53■■□□□ 1.68
HPS6-201ENST00000299238 TMEM2Q9UHN6 1383 aa25.53■■□□□ 1.68
HPS6-201ENST00000299238 HDGFP51858 240 aaKnown RBP25.52■■□□□ 1.68
HPS6-201ENST00000299238 USP19O94966 1318 aa25.51■■□□□ 1.68
HPS6-201ENST00000299238 ITSN1Q15811 1721 aa25.51■■□□□ 1.67
HPS6-201ENST00000299238 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
HPS6-201ENST00000299238 AKAP12Q02952 1782 aa25.51■■□□□ 1.67
HPS6-201ENST00000299238 FBLN1P23142 703 aa25.5■■□□□ 1.67
HPS6-201ENST00000299238 EXOSC9Q06265 439 aaKnown RBP25.49■■□□□ 1.67
HPS6-201ENST00000299238 MVPQ14764 893 aaKnown RBP25.49■■□□□ 1.67
HPS6-201ENST00000299238 ZKSCAN2Q63HK3 967 aa25.49■■□□□ 1.67
HPS6-201ENST00000299238 SIRT1Q96EB6 747 aa25.49■■□□□ 1.67
HPS6-201ENST00000299238 SLKQ9H2G2 1235 aaPredicted RBP25.49■■□□□ 1.67
HPS6-201ENST00000299238 IL16Q14005 1332 aa25.48■■□□□ 1.67
HPS6-201ENST00000299238 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
HPS6-201ENST00000299238 RIPK4P57078 832 aa25.48■■□□□ 1.67
HPS6-201ENST00000299238 C3P01024 1663 aa25.47■■□□□ 1.67
HPS6-201ENST00000299238 NME9Q86XW9 330 aa25.47■■□□□ 1.67
HPS6-201ENST00000299238 ADAMTS13Q76LX8 1427 aa25.46■■□□□ 1.67
HPS6-201ENST00000299238 DZIP1LQ8IYY4 767 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms