RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
FOXN4-201ENST00000299162 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
FOXN4-201ENST00000299162 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
FOXN4-201ENST00000299162 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
FOXN4-201ENST00000299162 METP08581 1390 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
FOXN4-201ENST00000299162 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
FOXN4-201ENST00000299162 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
FOXN4-201ENST00000299162 GSE1Q14687 1217 aa12.92□□□□□ -0.34
FOXN4-201ENST00000299162 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
FOXN4-201ENST00000299162 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
FOXN4-201ENST00000299162 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
FOXN4-201ENST00000299162 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
FOXN4-201ENST00000299162 POLKQ9UBT6 870 aa12.91□□□□□ -0.34
FOXN4-201ENST00000299162 ARHGAP31Q2M1Z3 1444 aa12.91□□□□□ -0.34
FOXN4-201ENST00000299162 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
FOXN4-201ENST00000299162 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
FOXN4-201ENST00000299162 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
FOXN4-201ENST00000299162 INSRP06213 1382 aa12.9□□□□□ -0.34
FOXN4-201ENST00000299162 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
FOXN4-201ENST00000299162 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
FOXN4-201ENST00000299162 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 COG3Q96JB2 828 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 PTPRMP28827 1452 aa12.89□□□□□ -0.35
FOXN4-201ENST00000299162 MS4A1P11836 297 aa12.88□□□□□ -0.35
FOXN4-201ENST00000299162 LTKP29376 864 aa12.88□□□□□ -0.35
FOXN4-201ENST00000299162 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
FOXN4-201ENST00000299162 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
FOXN4-201ENST00000299162 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
FOXN4-201ENST00000299162 ALKQ9UM73 1620 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
FOXN4-201ENST00000299162 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
FOXN4-201ENST00000299162 PDE3AQ14432 1141 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
FOXN4-201ENST00000299162 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
FOXN4-201ENST00000299162 TRIM27P14373 513 aa12.85□□□□□ -0.35
FOXN4-201ENST00000299162 PDE4CQ08493 712 aa12.85□□□□□ -0.35
FOXN4-201ENST00000299162 ZC3H13Q5T200 1668 aaKnown RBP12.85□□□□□ -0.35
FOXN4-201ENST00000299162 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
FOXN4-201ENST00000299162 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
FOXN4-201ENST00000299162 SEC24BO95487 1268 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
FOXN4-201ENST00000299162 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 TSPYL6Q8N831 410 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
FOXN4-201ENST00000299162 NSD2O96028 1365 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 TNRQ92752 1358 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 FGD1P98174 961 aa12.84□□□□□ -0.35
FOXN4-201ENST00000299162 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 NGDNQ8NEJ9 315 aaKnown RBP12.83□□□□□ -0.36
FOXN4-201ENST00000299162 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 AAMPQ13685 434 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
FOXN4-201ENST00000299162 MIS18AQ9NYP9 233 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
FOXN4-201ENST00000299162 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
FOXN4-201ENST00000299162 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
FOXN4-201ENST00000299162 ZFYVE9O95405 1425 aa12.82□□□□□ -0.36
FOXN4-201ENST00000299162 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
FOXN4-201ENST00000299162 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
FOXN4-201ENST00000299162 PHF23Q9BUL5 403 aaPredicted RBP12.81□□□□□ -0.36
FOXN4-201ENST00000299162 ACEP12821 1306 aa12.81□□□□□ -0.36
FOXN4-201ENST00000299162 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
FOXN4-201ENST00000299162 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
FOXN4-201ENST00000299162 FCHSD2O94868 740 aa12.81□□□□□ -0.36
FOXN4-201ENST00000299162 MCM10Q7L590 875 aa12.81□□□□□ -0.36
FOXN4-201ENST00000299162 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
FOXN4-201ENST00000299162 APBB1O00213 710 aa12.8□□□□□ -0.36
FOXN4-201ENST00000299162 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
FOXN4-201ENST00000299162 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
FOXN4-201ENST00000299162 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms