RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 U2AF1L5P0DN76 240 aaPredicted RBP19.89■□□□□ 0.78
UBAP1-201ENST00000297661 RLBP1P12271 317 aa19.89■□□□□ 0.78
UBAP1-201ENST00000297661 U2AF1Q01081 240 aaKnown RBP eCLIP19.89■□□□□ 0.78
UBAP1-201ENST00000297661 TMEM2Q9UHN6 1383 aa19.89■□□□□ 0.78
UBAP1-201ENST00000297661 CGNL1Q0VF96 1302 aa19.89■□□□□ 0.77
UBAP1-201ENST00000297661 RARSP54136 660 aaKnown RBP19.88■□□□□ 0.77
UBAP1-201ENST00000297661 VSIG10Q8N0Z9 540 aa19.88■□□□□ 0.77
UBAP1-201ENST00000297661 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
UBAP1-201ENST00000297661 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
UBAP1-201ENST00000297661 PPLO60437 1756 aa19.87■□□□□ 0.77
UBAP1-201ENST00000297661 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
UBAP1-201ENST00000297661 ZMYND15Q9H091 742 aa19.87■□□□□ 0.77
UBAP1-201ENST00000297661 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
UBAP1-201ENST00000297661 PDE3AQ14432 1141 aa19.86■□□□□ 0.77
UBAP1-201ENST00000297661 EID1Q9Y6B2 187 aa19.86■□□□□ 0.77
UBAP1-201ENST00000297661 NAP1L5Q96NT1 182 aaPredicted RBP19.86■□□□□ 0.77
UBAP1-201ENST00000297661 SEC24BO95487 1268 aa19.85■□□□□ 0.77
UBAP1-201ENST00000297661 GGNBP2Q9H3C7 697 aa19.85■□□□□ 0.77
UBAP1-201ENST00000297661 EVC2Q86UK5 1308 aa19.85■□□□□ 0.77
UBAP1-201ENST00000297661 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
UBAP1-201ENST00000297661 CFAP53Q96M91 514 aa19.85■□□□□ 0.77
UBAP1-201ENST00000297661 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
UBAP1-201ENST00000297661 U2SURPO15042 1029 aaKnown RBP19.84■□□□□ 0.77
UBAP1-201ENST00000297661 TSR2Q969E8 191 aaKnown RBP19.84■□□□□ 0.77
UBAP1-201ENST00000297661 SLKQ9H2G2 1235 aaPredicted RBP19.83■□□□□ 0.77
UBAP1-201ENST00000297661 PCDHB15Q9Y5E8 787 aa19.83■□□□□ 0.77
UBAP1-201ENST00000297661 USP19O94966 1318 aa19.83■□□□□ 0.77
UBAP1-201ENST00000297661 VGFO15240 615 aaPredicted RBP19.82■□□□□ 0.76
UBAP1-201ENST00000297661 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
UBAP1-201ENST00000297661 MINK1Q8N4C8 1332 aaPredicted RBP19.82■□□□□ 0.76
UBAP1-201ENST00000297661 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
UBAP1-201ENST00000297661 TULP4Q9NRJ4 1543 aa19.82■□□□□ 0.76
UBAP1-201ENST00000297661 ARXQ96QS3 562 aa19.82■□□□□ 0.76
UBAP1-201ENST00000297661 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
UBAP1-201ENST00000297661 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
UBAP1-201ENST00000297661 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
UBAP1-201ENST00000297661 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
UBAP1-201ENST00000297661 IQSEC2Q5JU85 1478 aa19.81■□□□□ 0.76
UBAP1-201ENST00000297661 BECN1Q14457 450 aa19.8■□□□□ 0.76
UBAP1-201ENST00000297661 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
UBAP1-201ENST00000297661 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
UBAP1-201ENST00000297661 ANKRD36BQ8N2N9 1353 aa19.79■□□□□ 0.76
UBAP1-201ENST00000297661 XRCC6P12956 609 aaKnown RBP eCLIP19.78■□□□□ 0.762e-10■■■■■ 48.3
UBAP1-201ENST00000297661 WDR63Q8IWG1 891 aa19.78■□□□□ 0.76
UBAP1-201ENST00000297661 HSP90AA1P07900 732 aaKnown RBP19.78■□□□□ 0.76
UBAP1-201ENST00000297661 CLCN1P35523 988 aa19.78■□□□□ 0.76
UBAP1-201ENST00000297661 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
UBAP1-201ENST00000297661 STRCQ7RTU9 1775 aa19.77■□□□□ 0.76
UBAP1-201ENST00000297661 RRP9O43818 475 aaKnown RBP19.77■□□□□ 0.76
UBAP1-201ENST00000297661 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
UBAP1-201ENST00000297661 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
UBAP1-201ENST00000297661 FBLN1P23142 703 aa19.76■□□□□ 0.75
UBAP1-201ENST00000297661 SLIT1O75093 1534 aa19.75■□□□□ 0.75
UBAP1-201ENST00000297661 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.75■□□□□ 0.75
UBAP1-201ENST00000297661 GOLGA6L3A6NEY3 463 aa19.75■□□□□ 0.75
UBAP1-201ENST00000297661 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
UBAP1-201ENST00000297661 ANTXR1Q9H6X2 564 aa19.74■□□□□ 0.75
UBAP1-201ENST00000297661 ARHGEF28Q8N1W1 1705 aaKnown RBP19.74■□□□□ 0.75
UBAP1-201ENST00000297661 MYH16Q9H6N6 1097 aa19.74■□□□□ 0.75
UBAP1-201ENST00000297661 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
UBAP1-201ENST00000297661 EXOSC9Q06265 439 aaKnown RBP19.73■□□□□ 0.75
UBAP1-201ENST00000297661 NPHP4O75161 1426 aaPredicted RBP19.73■□□□□ 0.75
UBAP1-201ENST00000297661 PANK2Q9BZ23 570 aa19.73■□□□□ 0.75
UBAP1-201ENST00000297661 NINLQ9Y2I6 1382 aa19.72■□□□□ 0.75
UBAP1-201ENST00000297661 VIRMAQ69YN4 1812 aaKnown RBP19.72■□□□□ 0.75
UBAP1-201ENST00000297661 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
UBAP1-201ENST00000297661 FSD2A1L4K1 749 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 FYB1O15117 783 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 SMC4Q9NTJ3 1288 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 METP08581 1390 aa19.71■□□□□ 0.75
UBAP1-201ENST00000297661 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
UBAP1-201ENST00000297661 ZNF335Q9H4Z2 1342 aaPredicted RBP19.7■□□□□ 0.74
UBAP1-201ENST00000297661 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
UBAP1-201ENST00000297661 TRIM35Q9UPQ4 493 aa19.69■□□□□ 0.74
UBAP1-201ENST00000297661 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
UBAP1-201ENST00000297661 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
UBAP1-201ENST00000297661 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
UBAP1-201ENST00000297661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.68■□□□□ 0.74
UBAP1-201ENST00000297661 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
UBAP1-201ENST00000297661 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
UBAP1-201ENST00000297661 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
UBAP1-201ENST00000297661 USP32Q8NFA0 1604 aa19.68■□□□□ 0.74
UBAP1-201ENST00000297661 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
UBAP1-201ENST00000297661 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
UBAP1-201ENST00000297661 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
UBAP1-201ENST00000297661 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
UBAP1-201ENST00000297661 NSD2O96028 1365 aa19.66■□□□□ 0.74
UBAP1-201ENST00000297661 RIPK4P57078 832 aa19.66■□□□□ 0.74
UBAP1-201ENST00000297661 ITPRIPQ8IWB1 547 aa19.66■□□□□ 0.74
UBAP1-201ENST00000297661 NRXN3Q9Y4C0 1643 aa19.66■□□□□ 0.74
UBAP1-201ENST00000297661 TRIM27P14373 513 aa19.66■□□□□ 0.74
UBAP1-201ENST00000297661 RWDD1Q9H446 243 aaPredicted RBP19.66■□□□□ 0.74
UBAP1-201ENST00000297661 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
UBAP1-201ENST00000297661 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
UBAP1-201ENST00000297661 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.73
UBAP1-201ENST00000297661 PUS7Q96PZ0 661 aaKnown RBP19.64■□□□□ 0.73
UBAP1-201ENST00000297661 KCNA6P17658 529 aa19.64■□□□□ 0.73
UBAP1-201ENST00000297661 TBC1D2Q9BYX2 928 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms