RNA–Protein interactions for RNA: ENST00000297338.6

RAD21-201, Transcript of RAD21 cohesin complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD21, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21-201ENST00000297338 LMBRD1Q9NUN5 540 aa11.56□□□□□ -0.56
RAD21-201ENST00000297338 IPO8O15397 1037 aaKnown RBP11.56□□□□□ -0.56
RAD21-201ENST00000297338 CD2BP2O95400 341 aaKnown RBP11.56□□□□□ -0.56
RAD21-201ENST00000297338 MORC1Q86VD1 984 aa11.56□□□□□ -0.56
RAD21-201ENST00000297338 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
RAD21-201ENST00000297338 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 FAM177BA6PVY3 158 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 ST18O60284 1047 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 PHF14O94880 888 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 NOLC1Q14978 699 aaKnown RBP eCLIP11.55□□□□□ -0.564e-6■■□□□ 11.5
RAD21-201ENST00000297338 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
RAD21-201ENST00000297338 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 BMP2KLQ5H9B9 411 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
RAD21-201ENST00000297338 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
RAD21-201ENST00000297338 PTPRGP23470 1445 aa11.54□□□□□ -0.56
RAD21-201ENST00000297338 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
RAD21-201ENST00000297338 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
RAD21-201ENST00000297338 NUP153P49790 1475 aaKnown RBP11.53□□□□□ -0.56
RAD21-201ENST00000297338 CDC45O75419 566 aa11.53□□□□□ -0.56
RAD21-201ENST00000297338 ATP2B3Q16720 1220 aa11.53□□□□□ -0.56
RAD21-201ENST00000297338 ZNF830Q96NB3 372 aaPredicted RBP11.53□□□□□ -0.56
RAD21-201ENST00000297338 CCDC66A2RUB6 948 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 CASC1Q6TDU7 716 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 ATF7IPQ6VMQ6 1270 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 MAGI2Q86UL8 1455 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 ABCC2Q92887 1545 aa11.52□□□□□ -0.56
RAD21-201ENST00000297338 NUCB1Q02818 461 aa11.52□□□□□ -0.57
RAD21-201ENST00000297338 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
RAD21-201ENST00000297338 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
RAD21-201ENST00000297338 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.57
RAD21-201ENST00000297338 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.57
RAD21-201ENST00000297338 TRIM27P14373 513 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
RAD21-201ENST00000297338 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.572e-12■■□□□ 13.5
RAD21-201ENST00000297338 HNRNPMP52272 730 aaKnown RBP eCLIP11.51□□□□□ -0.572e-9■■■■□ 20.1
RAD21-201ENST00000297338 TMEM63CQ9P1W3 806 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 ADGRL2O95490 1459 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
RAD21-201ENST00000297338 U2AF2P26368 475 aaKnown RBP eCLIP11.5□□□□□ -0.579e-8■■■■□ 20.7
RAD21-201ENST00000297338 MAPK8IP2Q13387 824 aaPredicted RBP11.5□□□□□ -0.57
RAD21-201ENST00000297338 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 GPT2Q8TD30 523 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 TTC12Q9H892 705 aaPredicted RBP11.5□□□□□ -0.57
RAD21-201ENST00000297338 ABCA8O94911 1581 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
RAD21-201ENST00000297338 KCNJ4P48050 445 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
RAD21-201ENST00000297338 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
RAD21-201ENST00000297338 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
RAD21-201ENST00000297338 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
RAD21-201ENST00000297338 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
RAD21-201ENST00000297338 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 FAM184AQ8NB25 1140 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 KIF2CQ99661 725 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 FEZ1Q99689 392 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
RAD21-201ENST00000297338 ZCCHC11Q5TAX3 1644 aaKnown RBP11.48□□□□□ -0.57
RAD21-201ENST00000297338 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
RAD21-201ENST00000297338 FOXD4L6Q3SYB3 417 aaPredicted RBP11.48□□□□□ -0.57
RAD21-201ENST00000297338 FOXD4L3Q6VB84 417 aaPredicted RBP11.48□□□□□ -0.57
RAD21-201ENST00000297338 C17orf53Q8N3J3 647 aaPredicted RBP11.48□□□□□ -0.57
RAD21-201ENST00000297338 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
RAD21-201ENST00000297338 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
RAD21-201ENST00000297338 PKP1Q13835 747 aa11.48□□□□□ -0.57
RAD21-201ENST00000297338 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
RAD21-201ENST00000297338 WDR7Q9Y4E6 1490 aa11.47□□□□□ -0.57
RAD21-201ENST00000297338 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
RAD21-201ENST00000297338 OGFRQ9NZT2 677 aa11.47□□□□□ -0.57
RAD21-201ENST00000297338 ADCY5O95622 1261 aa11.46□□□□□ -0.57
RAD21-201ENST00000297338 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
RAD21-201ENST00000297338 ATP10BO94823 1461 aa11.46□□□□□ -0.58
RAD21-201ENST00000297338 FAM135AQ9P2D6 1515 aa11.46□□□□□ -0.58
RAD21-201ENST00000297338 UVSSAQ2YD98 709 aa11.46□□□□□ -0.58
RAD21-201ENST00000297338 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.58
RAD21-201ENST00000297338 ZBTB40Q9NUA8 1239 aa11.46□□□□□ -0.58
RAD21-201ENST00000297338 A2MP01023 1474 aa11.45□□□□□ -0.58
RAD21-201ENST00000297338 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
RAD21-201ENST00000297338 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 TPM3P06753 285 aa11.45□□□□□ -0.58
RAD21-201ENST00000297338 GABPB1Q06547 395 aaPredicted RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
RAD21-201ENST00000297338 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
RAD21-201ENST00000297338 ZBTB22O15209 634 aa11.44□□□□□ -0.58
RAD21-201ENST00000297338 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
RAD21-201ENST00000297338 PRDM15P57071 1507 aaPredicted RBP11.44□□□□□ -0.58
RAD21-201ENST00000297338 MTHFSP49914 203 aa11.44□□□□□ -0.58
RAD21-201ENST00000297338 DNAJC2Q99543 621 aaKnown RBP11.44□□□□□ -0.58
RAD21-201ENST00000297338 TRPM1Q7Z4N2 1603 aa11.44□□□□□ -0.58
RAD21-201ENST00000297338 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms