RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 AAMPQ13685 434 aa12.72□□□□□ -0.37
ARHGEF3-201ENST00000296315 KIF2CQ99661 725 aa12.72□□□□□ -0.37
ARHGEF3-201ENST00000296315 ZKSCAN5Q9Y2L8 839 aa12.72□□□□□ -0.37
ARHGEF3-201ENST00000296315 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 GGT6Q6P531 493 aa12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 E9PCH4 1651 aa12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 CDC45O75419 566 aa12.71□□□□□ -0.37
ARHGEF3-201ENST00000296315 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 NUCB2P80303 420 aa12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 KIAA2012Q0VF49 1180 aa12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 MAP7D2Q96T17 732 aa12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 TMEM63CQ9P1W3 806 aa12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.38
ARHGEF3-201ENST00000296315 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 GPT2Q8TD30 523 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 CEP170Q5SW79 1584 aa12.7□□□□□ -0.38
ARHGEF3-201ENST00000296315 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 CSPP1Q1MSJ5 1256 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 AK9Q5TCS8 1911 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 ST18O60284 1047 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 NEK4P51957 841 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
ARHGEF3-201ENST00000296315 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 TRPM1Q7Z4N2 1603 aa12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
ARHGEF3-201ENST00000296315 DDIT3P35638 169 aa12.67□□□□□ -0.38
ARHGEF3-201ENST00000296315 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
ARHGEF3-201ENST00000296315 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
ARHGEF3-201ENST00000296315 CASC1Q6TDU7 716 aa12.67□□□□□ -0.38
ARHGEF3-201ENST00000296315 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 RABEP1Q15276 862 aa12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
ARHGEF3-201ENST00000296315 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
ARHGEF3-201ENST00000296315 TSPY26PQ9H489 355 aa12.65□□□□□ -0.38
ARHGEF3-201ENST00000296315 UPF3BQ9BZI7 483 aaKnown RBP12.65□□□□□ -0.38
ARHGEF3-201ENST00000296315 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF3-201ENST00000296315 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
ARHGEF3-201ENST00000296315 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZNF445P59923 1031 aa12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZNF771Q7L3S4 317 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 POLR3AO14802 1390 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
ARHGEF3-201ENST00000296315 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
ARHGEF3-201ENST00000296315 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
ARHGEF3-201ENST00000296315 DCTN1Q14203 1278 aa12.63□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF3-201ENST00000296315 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF3-201ENST00000296315 GADD45BO75293 160 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 SOX12O15370 315 aa12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 INTS3Q68E01 1043 aaKnown RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 ITSN2Q9NZM3 1697 aa12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
ARHGEF3-201ENST00000296315 VGLL3A8MV65 326 aa12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 U2AF2P26368 475 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 8.9
ARHGEF3-201ENST00000296315 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 FIBPO43427 364 aa12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZNF592Q92610 1267 aa12.61□□□□□ -0.39
ARHGEF3-201ENST00000296315 CHAF1AQ13111 956 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 NOLC1Q14978 699 aaKnown RBP eCLIP12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 ADCY5O95622 1261 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 SDSP20132 328 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 PLEKHM2Q8IWE5 1019 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms