RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 ATF7IPQ6VMQ6 1270 aa18.76■□□□□ 0.59
CCT3-201ENST00000295688 U2SURPO15042 1029 aaKnown RBP18.75■□□□□ 0.59
CCT3-201ENST00000295688 COL3A1P02461 1466 aaPredicted RBP18.75■□□□□ 0.59
CCT3-201ENST00000295688 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
CCT3-201ENST00000295688 C22orf23Q9BZE7 217 aa18.74■□□□□ 0.59
CCT3-201ENST00000295688 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
CCT3-201ENST00000295688 TRIM35Q9UPQ4 493 aa18.74■□□□□ 0.59
CCT3-201ENST00000295688 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
CCT3-201ENST00000295688 TRIM27P14373 513 aa18.74■□□□□ 0.59
CCT3-201ENST00000295688 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
CCT3-201ENST00000295688 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
CCT3-201ENST00000295688 SMC5Q8IY18 1101 aa18.73■□□□□ 0.59
CCT3-201ENST00000295688 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
CCT3-201ENST00000295688 POGKQ9P215 609 aa18.73■□□□□ 0.59
CCT3-201ENST00000295688 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
CCT3-201ENST00000295688 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
CCT3-201ENST00000295688 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
CCT3-201ENST00000295688 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
CCT3-201ENST00000295688 NEO1Q92859 1461 aa18.71■□□□□ 0.59
CCT3-201ENST00000295688 ZNF428Q96B54 188 aa18.71■□□□□ 0.59
CCT3-201ENST00000295688 CHMP5Q9NZZ3 219 aa18.71■□□□□ 0.59
CCT3-201ENST00000295688 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
CCT3-201ENST00000295688 DIAPH1O60610 1272 aaKnown RBP18.7■□□□□ 0.58
CCT3-201ENST00000295688 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
CCT3-201ENST00000295688 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
CCT3-201ENST00000295688 RIPK4P57078 832 aa18.69■□□□□ 0.58
CCT3-201ENST00000295688 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
CCT3-201ENST00000295688 FYB1O15117 783 aa18.69■□□□□ 0.58
CCT3-201ENST00000295688 HDGFL2Q7Z4V5 671 aaPredicted RBP18.69■□□□□ 0.58
CCT3-201ENST00000295688 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
CCT3-201ENST00000295688 PNPLA6Q8IY17 1366 aa18.68■□□□□ 0.58
CCT3-201ENST00000295688 IDI1Q13907 227 aa18.68■□□□□ 0.58
CCT3-201ENST00000295688 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
CCT3-201ENST00000295688 MCM4P33991 863 aa18.67■□□□□ 0.58
CCT3-201ENST00000295688 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
CCT3-201ENST00000295688 PTPRMP28827 1452 aa18.67■□□□□ 0.58
CCT3-201ENST00000295688 FCHSD2O94868 740 aa18.66■□□□□ 0.58
CCT3-201ENST00000295688 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
CCT3-201ENST00000295688 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCT3-201ENST00000295688 HSCBQ8IWL3 235 aa18.66■□□□□ 0.58
CCT3-201ENST00000295688 TMEM57Q8N5G2 664 aa18.66■□□□□ 0.58
CCT3-201ENST00000295688 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
CCT3-201ENST00000295688 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
CCT3-201ENST00000295688 STK26Q9P289 416 aa18.65■□□□□ 0.58
CCT3-201ENST00000295688 KIF20BQ96Q89 1820 aa18.65■□□□□ 0.58
CCT3-201ENST00000295688 NUCB1Q02818 461 aa18.64■□□□□ 0.57
CCT3-201ENST00000295688 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
CCT3-201ENST00000295688 CD163L1Q9NR16 1453 aa18.64■□□□□ 0.57
CCT3-201ENST00000295688 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
CCT3-201ENST00000295688 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
CCT3-201ENST00000295688 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
CCT3-201ENST00000295688 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
CCT3-201ENST00000295688 FSD2A1L4K1 749 aa18.62■□□□□ 0.57
CCT3-201ENST00000295688 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
CCT3-201ENST00000295688 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
CCT3-201ENST00000295688 GOLGA6L3A6NEY3 463 aa18.62■□□□□ 0.57
CCT3-201ENST00000295688 SNX21Q969T3 373 aa18.62■□□□□ 0.57
CCT3-201ENST00000295688 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
CCT3-201ENST00000295688 MYO5BQ9ULV0 1848 aa18.62■□□□□ 0.57
CCT3-201ENST00000295688 PREX1Q8TCU6 1659 aa18.61■□□□□ 0.57
CCT3-201ENST00000295688 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
CCT3-201ENST00000295688 ARHGAP45Q92619 1136 aa18.61■□□□□ 0.57
CCT3-201ENST00000295688 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
CCT3-201ENST00000295688 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
CCT3-201ENST00000295688 CHD1LQ86WJ1 897 aa18.59■□□□□ 0.57
CCT3-201ENST00000295688 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.57
CCT3-201ENST00000295688 RAPGEF3O95398 923 aa18.58■□□□□ 0.57
CCT3-201ENST00000295688 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.57
CCT3-201ENST00000295688 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.57
CCT3-201ENST00000295688 CDK19Q9BWU1 502 aa18.58■□□□□ 0.57
CCT3-201ENST00000295688 ISY1Q9ULR0 285 aaKnown RBP18.58■□□□□ 0.57
CCT3-201ENST00000295688 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.57
CCT3-201ENST00000295688 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.56
CCT3-201ENST00000295688 ARHGEF40Q8TER5 1519 aa18.58■□□□□ 0.56
CCT3-201ENST00000295688 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
CCT3-201ENST00000295688 TRAK2O60296 914 aa18.57■□□□□ 0.56
CCT3-201ENST00000295688 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
CCT3-201ENST00000295688 PTMSP20962 102 aa18.57■□□□□ 0.56
CCT3-201ENST00000295688 NFE2L2Q16236 605 aa18.57■□□□□ 0.56
CCT3-201ENST00000295688 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
CCT3-201ENST00000295688 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
CCT3-201ENST00000295688 ATP7BP35670 1465 aa18.56■□□□□ 0.56
CCT3-201ENST00000295688 GNAI1P63096 354 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 LNPKQ9C0E8 428 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 RRAGDQ9NQL2 400 aaPredicted RBP18.55■□□□□ 0.56
CCT3-201ENST00000295688 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 PRKAR2BP31323 418 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
CCT3-201ENST00000295688 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
CCT3-201ENST00000295688 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
CCT3-201ENST00000295688 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
CCT3-201ENST00000295688 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
CCT3-201ENST00000295688 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
CCT3-201ENST00000295688 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
CCT3-201ENST00000295688 VAMP4O75379 141 aa18.53■□□□□ 0.56
CCT3-201ENST00000295688 XRCC6P12956 609 aaKnown RBP eCLIP18.53■□□□□ 0.562e-6■□□□□ 9.4
CCT3-201ENST00000295688 DDIT3P35638 169 aa18.53■□□□□ 0.56
CCT3-201ENST00000295688 MRE11P49959 708 aa18.53■□□□□ 0.56
CCT3-201ENST00000295688 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms