RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 ASXL2Q76L83 1435 aa19.21■□□□□ 0.67
CAPN2-201ENST00000295006 AAMPQ13685 434 aa19.21■□□□□ 0.66
CAPN2-201ENST00000295006 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.66
CAPN2-201ENST00000295006 E9PCH4 1651 aa19.2■□□□□ 0.66
CAPN2-201ENST00000295006 UNC13BO14795 1591 aa19.2■□□□□ 0.66
CAPN2-201ENST00000295006 A0A1W2PP64 1363 aa19.2■□□□□ 0.66
CAPN2-201ENST00000295006 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
CAPN2-201ENST00000295006 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
CAPN2-201ENST00000295006 CHD1O14646 1710 aa19.19■□□□□ 0.66
CAPN2-201ENST00000295006 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
CAPN2-201ENST00000295006 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
CAPN2-201ENST00000295006 RTEL1-TNFRSF6BF6WH68 1400 aa19.18■□□□□ 0.66
CAPN2-201ENST00000295006 CALD1Q05682 793 aaKnown RBP19.18■□□□□ 0.66
CAPN2-201ENST00000295006 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
CAPN2-201ENST00000295006 GNAI1P63096 354 aa19.18■□□□□ 0.66
CAPN2-201ENST00000295006 DDX49Q9Y6V7 483 aaKnown RBP19.18■□□□□ 0.66
CAPN2-201ENST00000295006 ABCC1P33527 1531 aa19.17■□□□□ 0.66
CAPN2-201ENST00000295006 ANKRD36BQ8N2N9 1353 aa19.17■□□□□ 0.66
CAPN2-201ENST00000295006 SYNMO15061 1565 aa19.17■□□□□ 0.66
CAPN2-201ENST00000295006 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
CAPN2-201ENST00000295006 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
CAPN2-201ENST00000295006 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
CAPN2-201ENST00000295006 SULT6B1Q6IMI4 303 aa19.16■□□□□ 0.66
CAPN2-201ENST00000295006 KDM5AP29375 1690 aaKnown RBP19.16■□□□□ 0.66
CAPN2-201ENST00000295006 TRPM2O94759 1503 aa19.16■□□□□ 0.66
CAPN2-201ENST00000295006 DDX11L8A8MPP1 907 aa19.16■□□□□ 0.66
CAPN2-201ENST00000295006 SMARCA5O60264 1052 aaPredicted RBP19.16■□□□□ 0.66
CAPN2-201ENST00000295006 FCHSD2O94868 740 aa19.16■□□□□ 0.66
CAPN2-201ENST00000295006 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
CAPN2-201ENST00000295006 MADDQ8WXG6 1647 aa19.15■□□□□ 0.66
CAPN2-201ENST00000295006 FAM69CQ0P6D2 419 aa19.14■□□□□ 0.66
CAPN2-201ENST00000295006 MCM10Q7L590 875 aa19.14■□□□□ 0.66
CAPN2-201ENST00000295006 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.66
CAPN2-201ENST00000295006 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.66
CAPN2-201ENST00000295006 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
CAPN2-201ENST00000295006 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
CAPN2-201ENST00000295006 NPATQ14207 1427 aa19.13■□□□□ 0.65
CAPN2-201ENST00000295006 TRIM6-TRIM34B2RNG4 842 aa19.13■□□□□ 0.65
CAPN2-201ENST00000295006 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
CAPN2-201ENST00000295006 NFE2L2Q16236 605 aa19.13■□□□□ 0.65
CAPN2-201ENST00000295006 C16orf71Q8IYS4 520 aaPredicted RBP19.13■□□□□ 0.65
CAPN2-201ENST00000295006 CT47B1P0C2W7 299 aaPredicted RBP19.12■□□□□ 0.65
CAPN2-201ENST00000295006 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
CAPN2-201ENST00000295006 POLKQ9UBT6 870 aa19.12■□□□□ 0.65
CAPN2-201ENST00000295006 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
CAPN2-201ENST00000295006 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
CAPN2-201ENST00000295006 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
CAPN2-201ENST00000295006 MCTP1Q6DN14 999 aa19.11■□□□□ 0.65
CAPN2-201ENST00000295006 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
CAPN2-201ENST00000295006 TNPO1Q92973 898 aaKnown RBP19.11■□□□□ 0.65
CAPN2-201ENST00000295006 RILPL2Q969X0 211 aa19.11■□□□□ 0.65
CAPN2-201ENST00000295006 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
CAPN2-201ENST00000295006 API5Q9BZZ5 524 aaKnown RBP19.11■□□□□ 0.65
CAPN2-201ENST00000295006 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
CAPN2-201ENST00000295006 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
CAPN2-201ENST00000295006 NUCB1Q02818 461 aa19.09■□□□□ 0.65
CAPN2-201ENST00000295006 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
CAPN2-201ENST00000295006 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
CAPN2-201ENST00000295006 ARID3AQ99856 593 aa19.09■□□□□ 0.65
CAPN2-201ENST00000295006 AEBP1Q8IUX7 1158 aa19.08■□□□□ 0.65
CAPN2-201ENST00000295006 ZFYVE16Q7Z3T8 1539 aa19.08■□□□□ 0.65
CAPN2-201ENST00000295006 SSFA2P28290 1259 aa19.08■□□□□ 0.65
CAPN2-201ENST00000295006 CDC45O75419 566 aa19.08■□□□□ 0.64
CAPN2-201ENST00000295006 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 VAMP4O75379 141 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 PLCB2Q00722 1185 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 TSHZ3Q63HK5 1081 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 GCC1Q96CN9 775 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 GRPEL1Q9HAV7 217 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 F6X3S4 739 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 AMPHP49418 695 aa19.07■□□□□ 0.64
CAPN2-201ENST00000295006 RRAGDQ9NQL2 400 aaPredicted RBP19.07■□□□□ 0.64
CAPN2-201ENST00000295006 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
CAPN2-201ENST00000295006 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
CAPN2-201ENST00000295006 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
CAPN2-201ENST00000295006 ANTXR1Q9H6X2 564 aa19.06■□□□□ 0.64
CAPN2-201ENST00000295006 MRE11P49959 708 aa19.05■□□□□ 0.64
CAPN2-201ENST00000295006 K7ELQ4 463 aaPredicted RBP19.05■□□□□ 0.64
CAPN2-201ENST00000295006 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
CAPN2-201ENST00000295006 ZNF518AQ6AHZ1 1483 aa19.04■□□□□ 0.64
CAPN2-201ENST00000295006 ALDH1L2Q3SY69 923 aa19.04■□□□□ 0.64
CAPN2-201ENST00000295006 CAVIN1Q6NZI2 390 aaKnown RBP19.04■□□□□ 0.64
CAPN2-201ENST00000295006 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
CAPN2-201ENST00000295006 OTUD7AQ8TE49 926 aaPredicted RBP19.03■□□□□ 0.64
CAPN2-201ENST00000295006 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
CAPN2-201ENST00000295006 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
CAPN2-201ENST00000295006 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
CAPN2-201ENST00000295006 MRPL50Q8N5N7 158 aaKnown RBP19.03■□□□□ 0.64
CAPN2-201ENST00000295006 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
CAPN2-201ENST00000295006 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.64
CAPN2-201ENST00000295006 EXOC6BQ9Y2D4 811 aa19.02■□□□□ 0.64
CAPN2-201ENST00000295006 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
CAPN2-201ENST00000295006 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.63
CAPN2-201ENST00000295006 OS9Q13438 667 aaPredicted RBP19.01■□□□□ 0.63
CAPN2-201ENST00000295006 NSD2O96028 1365 aa19.01■□□□□ 0.63
CAPN2-201ENST00000295006 ST18O60284 1047 aa19.01■□□□□ 0.63
CAPN2-201ENST00000295006 CD2BP2O95400 341 aaKnown RBP19.01■□□□□ 0.63
CAPN2-201ENST00000295006 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms