RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
NCSTN-201ENST00000294785 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
NCSTN-201ENST00000294785 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
NCSTN-201ENST00000294785 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
NCSTN-201ENST00000294785 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
NCSTN-201ENST00000294785 FYB1O15117 783 aa17.45■□□□□ 0.38
NCSTN-201ENST00000294785 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
NCSTN-201ENST00000294785 STK26Q9P289 416 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
NCSTN-201ENST00000294785 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
NCSTN-201ENST00000294785 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 POGKQ9P215 609 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 REREQ9P2R6 1566 aa17.44■□□□□ 0.38
NCSTN-201ENST00000294785 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
NCSTN-201ENST00000294785 DDX19BQ9UMR2 479 aa17.42■□□□□ 0.38
NCSTN-201ENST00000294785 SEC24BO95487 1268 aa17.42■□□□□ 0.38
NCSTN-201ENST00000294785 MINK1Q8N4C8 1332 aaPredicted RBP17.42■□□□□ 0.38
NCSTN-201ENST00000294785 ATP7BP35670 1465 aa17.42■□□□□ 0.38
NCSTN-201ENST00000294785 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
NCSTN-201ENST00000294785 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
NCSTN-201ENST00000294785 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
NCSTN-201ENST00000294785 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
NCSTN-201ENST00000294785 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
NCSTN-201ENST00000294785 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
NCSTN-201ENST00000294785 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
NCSTN-201ENST00000294785 KIF16BQ96L93 1317 aa17.39■□□□□ 0.38
NCSTN-201ENST00000294785 AGLP35573 1532 aa17.39■□□□□ 0.37
NCSTN-201ENST00000294785 TRIM27P14373 513 aa17.39■□□□□ 0.37
NCSTN-201ENST00000294785 SETD1AO15047 1707 aaKnown RBP17.39■□□□□ 0.37
NCSTN-201ENST00000294785 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 FCHSD2O94868 740 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
NCSTN-201ENST00000294785 RIPK4P57078 832 aa17.37■□□□□ 0.37
NCSTN-201ENST00000294785 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
NCSTN-201ENST00000294785 IPO8O15397 1037 aaKnown RBP17.37■□□□□ 0.37
NCSTN-201ENST00000294785 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
NCSTN-201ENST00000294785 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
NCSTN-201ENST00000294785 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
NCSTN-201ENST00000294785 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
NCSTN-201ENST00000294785 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
NCSTN-201ENST00000294785 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
NCSTN-201ENST00000294785 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
NCSTN-201ENST00000294785 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
NCSTN-201ENST00000294785 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
NCSTN-201ENST00000294785 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
NCSTN-201ENST00000294785 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
NCSTN-201ENST00000294785 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
NCSTN-201ENST00000294785 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.37
NCSTN-201ENST00000294785 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
NCSTN-201ENST00000294785 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
NCSTN-201ENST00000294785 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
NCSTN-201ENST00000294785 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
NCSTN-201ENST00000294785 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
NCSTN-201ENST00000294785 CHMP4BQ9H444 224 aaKnown RBP17.31■□□□□ 0.36
NCSTN-201ENST00000294785 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
NCSTN-201ENST00000294785 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
NCSTN-201ENST00000294785 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
NCSTN-201ENST00000294785 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
NCSTN-201ENST00000294785 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
NCSTN-201ENST00000294785 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
NCSTN-201ENST00000294785 KNDC1Q76NI1 1749 aa17.29■□□□□ 0.36
NCSTN-201ENST00000294785 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
NCSTN-201ENST00000294785 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
NCSTN-201ENST00000294785 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 IL27Q8NEV9 243 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
NCSTN-201ENST00000294785 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
NCSTN-201ENST00000294785 ARHGAP45Q92619 1136 aa17.27■□□□□ 0.36
NCSTN-201ENST00000294785 PIK3R4Q99570 1358 aa17.27■□□□□ 0.35
NCSTN-201ENST00000294785 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
NCSTN-201ENST00000294785 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.35
NCSTN-201ENST00000294785 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-201ENST00000294785 NUCB1Q02818 461 aa17.25■□□□□ 0.35
NCSTN-201ENST00000294785 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
NCSTN-201ENST00000294785 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
NCSTN-201ENST00000294785 GNAI1P63096 354 aa17.24■□□□□ 0.35
NCSTN-201ENST00000294785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
NCSTN-201ENST00000294785 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
NCSTN-201ENST00000294785 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
NCSTN-201ENST00000294785 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
NCSTN-201ENST00000294785 ITSN1Q15811 1721 aa17.23■□□□□ 0.35
NCSTN-201ENST00000294785 DLG5Q8TDM6 1919 aa17.23■□□□□ 0.35
NCSTN-201ENST00000294785 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
NCSTN-201ENST00000294785 WAPLQ7Z5K2 1190 aa17.23■□□□□ 0.35
NCSTN-201ENST00000294785 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
NCSTN-201ENST00000294785 TECPR2O15040 1411 aa17.22■□□□□ 0.35
NCSTN-201ENST00000294785 IL13P35225 146 aa17.22■□□□□ 0.35
NCSTN-201ENST00000294785 C3P01024 1663 aa17.22■□□□□ 0.35
NCSTN-201ENST00000294785 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
NCSTN-201ENST00000294785 VAMP4O75379 141 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms