RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 GSE1Q14687 1217 aa7.96□□□□□ -1.14
VCAM1-201ENST00000294728 NEXMIFQ5QGS0 1516 aa7.95□□□□□ -1.14
VCAM1-201ENST00000294728 PMFBP1Q8TBY8 1022 aa7.95□□□□□ -1.14
VCAM1-201ENST00000294728 SPATA31A6Q5VVP1 1343 aa7.95□□□□□ -1.14
VCAM1-201ENST00000294728 C14orf93Q9H972 538 aaKnown RBP7.94□□□□□ -1.14
VCAM1-201ENST00000294728 NFKBIBQ15653 356 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 UPF1Q92900 1129 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCAM1-201ENST00000294728 RUNDC1Q96C34 613 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 CARD14Q9BXL6 1004 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 SENP3Q9H4L4 574 aaPredicted RBP7.94□□□□□ -1.14
VCAM1-201ENST00000294728 MSH6P52701 1360 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 USP19O94966 1318 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 ANKRD36BQ8N2N9 1353 aa7.94□□□□□ -1.14
VCAM1-201ENST00000294728 CENPJQ9HC77 1338 aaPredicted RBP7.93□□□□□ -1.14
VCAM1-201ENST00000294728 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
VCAM1-201ENST00000294728 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
VCAM1-201ENST00000294728 PLEKHG1Q9ULL1 1385 aa7.93□□□□□ -1.14
VCAM1-201ENST00000294728 IL16Q14005 1332 aa7.93□□□□□ -1.14
VCAM1-201ENST00000294728 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.93□□□□□ -1.14
VCAM1-201ENST00000294728 ABCC11Q96J66 1382 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 PROSER2Q86WR7 435 aaPredicted RBP7.92□□□□□ -1.14
VCAM1-201ENST00000294728 KIF20BQ96Q89 1820 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 NSD3Q9BZ95 1437 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 ZNF772Q68DY9 489 aaPredicted RBP7.92□□□□□ -1.14
VCAM1-201ENST00000294728 TMEM131LA2VDJ0 1609 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 APAF1O14727 1248 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 SLAIN2Q9P270 581 aa7.92□□□□□ -1.14
VCAM1-201ENST00000294728 NHSL1Q5SYE7 1610 aa7.91□□□□□ -1.14
VCAM1-201ENST00000294728 ADGRF5Q8IZF2 1346 aa7.91□□□□□ -1.14
VCAM1-201ENST00000294728 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
VCAM1-201ENST00000294728 MYO5BQ9ULV0 1848 aa7.91□□□□□ -1.14
VCAM1-201ENST00000294728 PPIP5K1Q6PFW1 1433 aa7.91□□□□□ -1.14
VCAM1-201ENST00000294728 BECN1Q14457 450 aa7.91□□□□□ -1.14
VCAM1-201ENST00000294728 SPINK5Q9NQ38 1064 aaPredicted RBP7.91□□□□□ -1.14
VCAM1-201ENST00000294728 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
VCAM1-201ENST00000294728 SALL2Q9Y467 1007 aaPredicted RBP7.91□□□□□ -1.14
VCAM1-201ENST00000294728 RARSP54136 660 aaKnown RBP7.9□□□□□ -1.14
VCAM1-201ENST00000294728 IDI1Q13907 227 aa7.9□□□□□ -1.14
VCAM1-201ENST00000294728 CNGB1Q14028 1251 aaPredicted RBP7.9□□□□□ -1.14
VCAM1-201ENST00000294728 PIK3R4Q99570 1358 aa7.9□□□□□ -1.15
VCAM1-201ENST00000294728 DLC1Q96QB1 1528 aa7.9□□□□□ -1.15
VCAM1-201ENST00000294728 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
VCAM1-201ENST00000294728 CFAP70Q5T0N1 1121 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 MYH16Q9H6N6 1097 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 DCCP43146 1447 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 SLC52A1Q9NWF4 448 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 ZNF428Q96B54 188 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 CFAP53Q96M91 514 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 PNPLA6Q8IY17 1366 aa7.89□□□□□ -1.15
VCAM1-201ENST00000294728 XRN1Q8IZH2 1706 aaKnown RBP7.88□□□□□ -1.15
VCAM1-201ENST00000294728 IGHDP01880 384 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 HDAC1Q13547 482 aaPredicted RBP7.88□□□□□ -1.15
VCAM1-201ENST00000294728 SLC26A8Q96RN1 970 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 ANTXR1Q9H6X2 564 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 LAS1LQ9Y4W2 734 aaKnown RBP7.88□□□□□ -1.15
VCAM1-201ENST00000294728 ADAMTS13Q76LX8 1427 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 BCAR3O75815 825 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 TBC1D32Q96NH3 1257 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 RIMS2Q9UQ26 1411 aa7.88□□□□□ -1.15
VCAM1-201ENST00000294728 RWDD1Q9H446 243 aaPredicted RBP7.87□□□□□ -1.15
VCAM1-201ENST00000294728 TBX22Q9Y458 520 aa7.87□□□□□ -1.15
VCAM1-201ENST00000294728 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
VCAM1-201ENST00000294728 FAM43AQ8N2R8 423 aa7.87□□□□□ -1.15
VCAM1-201ENST00000294728 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
VCAM1-201ENST00000294728 ISY1Q9ULR0 285 aaKnown RBP7.87□□□□□ -1.15
VCAM1-201ENST00000294728 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
VCAM1-201ENST00000294728 MORC1Q86VD1 984 aa7.86□□□□□ -1.15
VCAM1-201ENST00000294728 RGS12O14924 1447 aa7.86□□□□□ -1.15
VCAM1-201ENST00000294728 EIF5BO60841 1220 aaKnown RBP7.86□□□□□ -1.15
VCAM1-201ENST00000294728 RXRBP28702 533 aa7.86□□□□□ -1.15
VCAM1-201ENST00000294728 PNNQ9H307 717 aaKnown RBP7.86□□□□□ -1.15
VCAM1-201ENST00000294728 KIF16BQ96L93 1317 aa7.86□□□□□ -1.15
VCAM1-201ENST00000294728 MVPQ14764 893 aaKnown RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 TCP11L2Q8N4U5 519 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 UPF2Q9HAU5 1272 aaKnown RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 KNDC1Q76NI1 1749 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 NRXN3Q9Y4C0 1643 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 CD163L1Q9NR16 1453 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 VGFO15240 615 aaPredicted RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 L1TD1Q5T7N2 865 aaKnown RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 CADPS2Q86UW7 1296 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 CCDC146Q8IYE0 955 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 FRAT1Q92837 279 aaPredicted RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 RBM33Q96EV2 1170 aaKnown RBP7.85□□□□□ -1.15
VCAM1-201ENST00000294728 ATP7BP35670 1465 aa7.85□□□□□ -1.15
VCAM1-201ENST00000294728 HDGFP51858 240 aaKnown RBP7.84□□□□□ -1.15
VCAM1-201ENST00000294728 PLEKHF1Q96S99 279 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 ALDH1L2Q3SY69 923 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 MEX3CQ5U5Q3 659 aaKnown RBP7.84□□□□□ -1.15
VCAM1-201ENST00000294728 KIF24Q5T7B8 1368 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 ZKSCAN2Q63HK3 967 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 SMC5Q8IY18 1101 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.84□□□□□ -1.15
VCAM1-201ENST00000294728 CHMP4BQ9H444 224 aaKnown RBP7.84□□□□□ -1.15
VCAM1-201ENST00000294728 C19orf44Q9H6X5 657 aa7.84□□□□□ -1.15
VCAM1-201ENST00000294728 PTPRUQ92729 1446 aa7.84□□□□□ -1.16
VCAM1-201ENST00000294728 MST1RQ04912 1400 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms