RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 CRYBG1Q9Y4K1 1723 aa25.03■■□□□ 1.6
TFF3-201ENST00000291525 NBPF1Q3BBV0 1214 aa25.02■■□□□ 1.6
TFF3-201ENST00000291525 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
TFF3-201ENST00000291525 SEPT12Q8IYM1 358 aa25.01■■□□□ 1.59
TFF3-201ENST00000291525 BTG4Q9NY30 223 aa25■■□□□ 1.59
TFF3-201ENST00000291525 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
TFF3-201ENST00000291525 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
TFF3-201ENST00000291525 BLMP54132 1417 aaPredicted RBP24.98■■□□□ 1.59
TFF3-201ENST00000291525 ONECUT3O60422 494 aaPredicted RBP24.98■■□□□ 1.59
TFF3-201ENST00000291525 QRICH2Q9H0J4 1663 aa24.97■■□□□ 1.59
TFF3-201ENST00000291525 ACEP12821 1306 aa24.97■■□□□ 1.59
TFF3-201ENST00000291525 PRDM11Q9NQV5 511 aa24.97■■□□□ 1.59
TFF3-201ENST00000291525 EP400Q96L91 3159 aa24.97■■□□□ 1.59
TFF3-201ENST00000291525 PHRF1Q9P1Y6 1649 aaKnown RBP24.97■■□□□ 1.59
TFF3-201ENST00000291525 A0A0G2JS52 829 aa24.96■■□□□ 1.59
TFF3-201ENST00000291525 PLEKHG3A1L390 1219 aa24.96■■□□□ 1.59
TFF3-201ENST00000291525 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
TFF3-201ENST00000291525 MYT1Q01538 1121 aa24.96■■□□□ 1.59
TFF3-201ENST00000291525 L3MBTL2Q969R5 705 aa24.96■■□□□ 1.59
TFF3-201ENST00000291525 NBPF8Q3BBV2 869 aa24.95■■□□□ 1.58
TFF3-201ENST00000291525 SF3B2Q13435 895 aaKnown RBP24.94■■□□□ 1.58
TFF3-201ENST00000291525 KRT27Q7Z3Y8 459 aa24.94■■□□□ 1.58
TFF3-201ENST00000291525 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
TFF3-201ENST00000291525 PPIP5K1Q6PFW1 1433 aa24.93■■□□□ 1.58
TFF3-201ENST00000291525 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
TFF3-201ENST00000291525 FAM98CQ17RN3 349 aaKnown RBP24.91■■□□□ 1.58
TFF3-201ENST00000291525 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
TFF3-201ENST00000291525 BRD4O60885 1362 aaPredicted RBP24.9■■□□□ 1.58
TFF3-201ENST00000291525 SPATA31A5Q5VU36 1347 aa24.89■■□□□ 1.58
TFF3-201ENST00000291525 SPATA31A7Q8IWB4 1347 aa24.89■■□□□ 1.58
TFF3-201ENST00000291525 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
TFF3-201ENST00000291525 ABTB2Q8N961 1025 aa24.89■■□□□ 1.58
TFF3-201ENST00000291525 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.58
TFF3-201ENST00000291525 NUTM2GQ5VZR2 741 aa24.88■■□□□ 1.57
TFF3-201ENST00000291525 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
TFF3-201ENST00000291525 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
TFF3-201ENST00000291525 NRKQ7Z2Y5 1582 aa24.87■■□□□ 1.57
TFF3-201ENST00000291525 ZC3H6P61129 1189 aaKnown RBP24.86■■□□□ 1.57
TFF3-201ENST00000291525 EVC2Q86UK5 1308 aa24.86■■□□□ 1.57
TFF3-201ENST00000291525 CHRNA2Q15822 529 aa24.85■■□□□ 1.57
TFF3-201ENST00000291525 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
TFF3-201ENST00000291525 NLRP13Q86W25 1043 aa24.84■■□□□ 1.57
TFF3-201ENST00000291525 USP19O94966 1318 aa24.83■■□□□ 1.56
TFF3-201ENST00000291525 STRN4Q9NRL3 753 aa24.82■■□□□ 1.56
TFF3-201ENST00000291525 CPDO75976 1380 aa24.81■■□□□ 1.56
TFF3-201ENST00000291525 SPATA31A1Q5TZJ5 1347 aa24.81■■□□□ 1.56
TFF3-201ENST00000291525 USP6P35125 1406 aa24.8■■□□□ 1.56
TFF3-201ENST00000291525 EVA1CP58658 441 aa24.8■■□□□ 1.56
TFF3-201ENST00000291525 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
TFF3-201ENST00000291525 RGPD1P0DJD0 1748 aa24.8■■□□□ 1.56
TFF3-201ENST00000291525 BAG6P46379 1132 aa24.79■■□□□ 1.56
TFF3-201ENST00000291525 DEFB132Q7Z7B7 95 aa24.79■■□□□ 1.56
TFF3-201ENST00000291525 SSH2Q76I76 1423 aa24.78■■□□□ 1.56
TFF3-201ENST00000291525 LMO7Q8WWI1 1683 aa24.77■■□□□ 1.56
TFF3-201ENST00000291525 GCP02774 474 aa24.76■■□□□ 1.55
TFF3-201ENST00000291525 CAMTA1Q9Y6Y1 1673 aa24.75■■□□□ 1.55
TFF3-201ENST00000291525 NLRP6P59044 892 aa24.74■■□□□ 1.55
TFF3-201ENST00000291525 BARGINQ6ZT62 677 aa24.73■■□□□ 1.55
TFF3-201ENST00000291525 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
TFF3-201ENST00000291525 USP35Q9P2H5 1018 aa24.73■■□□□ 1.55
TFF3-201ENST00000291525 AKAP12Q02952 1782 aa24.72■■□□□ 1.55
TFF3-201ENST00000291525 SLIT3O75094 1523 aa24.72■■□□□ 1.55
TFF3-201ENST00000291525 TONSLQ96HA7 1378 aa24.71■■□□□ 1.55
TFF3-201ENST00000291525 PIK3C2AO00443 1686 aa24.71■■□□□ 1.55
TFF3-201ENST00000291525 LARP1Q6PKG0 1096 aaKnown RBP24.7■■□□□ 1.54
TFF3-201ENST00000291525 TCP11L2Q8N4U5 519 aa24.7■■□□□ 1.54
TFF3-201ENST00000291525 THRAP3Q9Y2W1 955 aaKnown RBP24.7■■□□□ 1.54
TFF3-201ENST00000291525 COL5A2P05997 1499 aaPredicted RBP24.7■■□□□ 1.54
TFF3-201ENST00000291525 SBNO2Q9Y2G9 1366 aa24.69■■□□□ 1.54
TFF3-201ENST00000291525 FAM182BQ5T319 152 aa24.69■■□□□ 1.54
TFF3-201ENST00000291525 FAM196AQ6ZSG2 479 aa24.69■■□□□ 1.54
TFF3-201ENST00000291525 TNS1Q9HBL0 1735 aaKnown RBP24.69■■□□□ 1.54
TFF3-201ENST00000291525 CARD11Q9BXL7 1154 aa24.68■■□□□ 1.54
TFF3-201ENST00000291525 ZBTB7CA1YPR0 619 aa24.67■■□□□ 1.54
TFF3-201ENST00000291525 PDE3BQ13370 1112 aa24.67■■□□□ 1.54
TFF3-201ENST00000291525 DISP2A7MBM2 1401 aa24.67■■□□□ 1.54
TFF3-201ENST00000291525 AATKQ6ZMQ8 1374 aa24.67■■□□□ 1.54
TFF3-201ENST00000291525 TTC21AQ8NDW8 1320 aa24.66■■□□□ 1.54
TFF3-201ENST00000291525 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
TFF3-201ENST00000291525 CRB1P82279 1406 aa24.65■■□□□ 1.54
TFF3-201ENST00000291525 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
TFF3-201ENST00000291525 KTN1Q86UP2 1357 aaKnown RBP24.64■■□□□ 1.53
TFF3-201ENST00000291525 PARP4Q9UKK3 1724 aaKnown RBP24.64■■□□□ 1.53
TFF3-201ENST00000291525 CPSF1Q10570 1443 aaKnown RBP24.63■■□□□ 1.53
TFF3-201ENST00000291525 EN1Q05925 392 aaPredicted RBP24.63■■□□□ 1.53
TFF3-201ENST00000291525 MON2Q7Z3U7 1717 aa24.62■■□□□ 1.53
TFF3-201ENST00000291525 TRIM37O94972 964 aa24.61■■□□□ 1.53
TFF3-201ENST00000291525 COL18A1P39060 1754 aa24.6■■□□□ 1.53
TFF3-201ENST00000291525 C11orf95C9JLR9 678 aaPredicted RBP24.6■■□□□ 1.53
TFF3-201ENST00000291525 PARD3Q8TEW0 1356 aa24.58■■□□□ 1.53
TFF3-201ENST00000291525 TOM1L2Q6ZVM7 507 aa24.58■■□□□ 1.53
TFF3-201ENST00000291525 LRP5O75197 1615 aa24.57■■□□□ 1.52
TFF3-201ENST00000291525 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
TFF3-201ENST00000291525 ARHGEF25Q86VW2 580 aa24.56■■□□□ 1.52
TFF3-201ENST00000291525 WDR17Q8IZU2 1322 aa24.56■■□□□ 1.52
TFF3-201ENST00000291525 ABCC6O95255 1503 aa24.56■■□□□ 1.52
TFF3-201ENST00000291525 SRCAPQ6ZRS2 3230 aa24.56■■□□□ 1.52
TFF3-201ENST00000291525 APBA3O96018 575 aa24.55■■□□□ 1.52
TFF3-201ENST00000291525 HDGFL2Q7Z4V5 671 aaPredicted RBP24.55■■□□□ 1.52
TFF3-201ENST00000291525 WNK3Q9BYP7 1800 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms