RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
GFRA4-201ENST00000290417 ATAD2Q6PL18 1390 aa31.89■■■□□ 2.7
GFRA4-201ENST00000290417 TESK2Q96S53 571 aa31.86■■■□□ 2.69
GFRA4-201ENST00000290417 AKAP12Q02952 1782 aa31.83■■■□□ 2.69
GFRA4-201ENST00000290417 CRYBG1Q9Y4K1 1723 aa31.82■■■□□ 2.68
GFRA4-201ENST00000290417 NUTM2GQ5VZR2 741 aa31.81■■■□□ 2.68
GFRA4-201ENST00000290417 USP6P35125 1406 aa31.81■■■□□ 2.68
GFRA4-201ENST00000290417 SLC24A1O60721 1099 aa31.8■■■□□ 2.68
GFRA4-201ENST00000290417 USP21Q9UK80 565 aa31.79■■■□□ 2.68
GFRA4-201ENST00000290417 FNBP4Q8N3X1 1017 aaPredicted RBP31.78■■■□□ 2.68
GFRA4-201ENST00000290417 ABTB2Q8N961 1025 aa31.78■■■□□ 2.68
GFRA4-201ENST00000290417 TMC1Q8TDI8 760 aa31.77■■■□□ 2.68
GFRA4-201ENST00000290417 BRD4O60885 1362 aaPredicted RBP31.77■■■□□ 2.68
GFRA4-201ENST00000290417 PHRF1Q9P1Y6 1649 aaKnown RBP31.76■■■□□ 2.67
GFRA4-201ENST00000290417 PUS7Q96PZ0 661 aaKnown RBP31.75■■■□□ 2.67
GFRA4-201ENST00000290417 ZNF692Q9BU19 519 aaPredicted RBP31.75■■■□□ 2.67
GFRA4-201ENST00000290417 QTRT2Q9H974 415 aaKnown RBP31.75■■■□□ 2.67
GFRA4-201ENST00000290417 CPSF1Q10570 1443 aaKnown RBP31.73■■■□□ 2.67
GFRA4-201ENST00000290417 TMF1P82094 1093 aa31.73■■■□□ 2.67
GFRA4-201ENST00000290417 PLCH1Q4KWH8 1693 aa31.72■■■□□ 2.67
GFRA4-201ENST00000290417 MON2Q7Z3U7 1717 aa31.72■■■□□ 2.67
GFRA4-201ENST00000290417 SLC12A5Q9H2X9 1139 aa31.72■■■□□ 2.67
GFRA4-201ENST00000290417 KTN1Q86UP2 1357 aaKnown RBP31.72■■■□□ 2.67
GFRA4-201ENST00000290417 BCL9LQ86UU0 1499 aa31.71■■■□□ 2.67
GFRA4-201ENST00000290417 SSH2Q76I76 1423 aa31.71■■■□□ 2.67
GFRA4-201ENST00000290417 RXRBP28702 533 aa31.71■■■□□ 2.67
GFRA4-201ENST00000290417 SLIT2O94813 1529 aa31.7■■■□□ 2.67
GFRA4-201ENST00000290417 SOCS7O14512 581 aa31.7■■■□□ 2.67
GFRA4-201ENST00000290417 NRKQ7Z2Y5 1582 aa31.7■■■□□ 2.66
GFRA4-201ENST00000290417 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.69■■■□□ 2.66
GFRA4-201ENST00000290417 PIK3C2AO00443 1686 aa31.69■■■□□ 2.66
GFRA4-201ENST00000290417 CD163L1Q9NR16 1453 aa31.69■■■□□ 2.66
GFRA4-201ENST00000290417 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
GFRA4-201ENST00000290417 TRPC5Q9UL62 973 aaPredicted RBP31.68■■■□□ 2.66
GFRA4-201ENST00000290417 NWD2Q9ULI1 1742 aa31.68■■■□□ 2.66
GFRA4-201ENST00000290417 TTC21BQ7Z4L5 1316 aa31.68■■■□□ 2.66
GFRA4-201ENST00000290417 FAM83GA6ND36 823 aa31.67■■■□□ 2.66
GFRA4-201ENST00000290417 COL14A1Q05707 1796 aaKnown RBP31.67■■■□□ 2.66
GFRA4-201ENST00000290417 HDGFL2Q7Z4V5 671 aaPredicted RBP31.66■■■□□ 2.66
GFRA4-201ENST00000290417 ATRNO75882 1429 aa31.66■■■□□ 2.66
GFRA4-201ENST00000290417 RBM6P78332 1123 aaKnown RBP31.66■■■□□ 2.66
GFRA4-201ENST00000290417 NLRP6P59044 892 aa31.65■■■□□ 2.66
GFRA4-201ENST00000290417 UNC5CLQ8IV45 518 aa31.65■■■□□ 2.66
GFRA4-201ENST00000290417 TERF2IPQ9NYB0 399 aa31.65■■■□□ 2.66
GFRA4-201ENST00000290417 USP19O94966 1318 aa31.64■■■□□ 2.66
GFRA4-201ENST00000290417 EIF4G2P78344 907 aaKnown RBP eCLIP31.64■■■□□ 2.66
GFRA4-201ENST00000290417 NINLQ9Y2I6 1382 aa31.64■■■□□ 2.65
GFRA4-201ENST00000290417 PRDM11Q9NQV5 511 aa31.63■■■□□ 2.65
GFRA4-201ENST00000290417 TTC21AQ8NDW8 1320 aa31.62■■■□□ 2.65
GFRA4-201ENST00000290417 ZC3H6P61129 1189 aaKnown RBP31.62■■■□□ 2.65
GFRA4-201ENST00000290417 CDCA8Q53HL2 280 aa31.62■■■□□ 2.65
GFRA4-201ENST00000290417 A0A1W2PP64 1363 aa31.62■■■□□ 2.65
GFRA4-201ENST00000290417 KIAA0232Q92628 1395 aa31.62■■■□□ 2.65
GFRA4-201ENST00000290417 HSPA5P11021 654 aaKnown RBP31.6■■■□□ 2.65
GFRA4-201ENST00000290417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.6■■■□□ 2.65
GFRA4-201ENST00000290417 NRAPQ86VF7 1730 aa31.59■■■□□ 2.65
GFRA4-201ENST00000290417 CDK12Q9NYV4 1490 aaPredicted RBP31.59■■■□□ 2.65
GFRA4-201ENST00000290417 BTG4Q9NY30 223 aa31.58■■■□□ 2.65
GFRA4-201ENST00000290417 GCP02774 474 aa31.58■■■□□ 2.65
GFRA4-201ENST00000290417 CHRNA2Q15822 529 aa31.58■■■□□ 2.65
GFRA4-201ENST00000290417 EDC4Q6P2E9 1401 aaKnown RBP31.57■■■□□ 2.64
GFRA4-201ENST00000290417 SLIT3O75094 1523 aa31.56■■■□□ 2.64
GFRA4-201ENST00000290417 GJD4Q96KN9 370 aaPredicted RBP31.55■■■□□ 2.64
GFRA4-201ENST00000290417 RGS12O14924 1447 aa31.54■■■□□ 2.64
GFRA4-201ENST00000290417 CCDC9Q9Y3X0 531 aaKnown RBP31.53■■■□□ 2.64
GFRA4-201ENST00000290417 VPS72Q15906 364 aa31.52■■■□□ 2.64
GFRA4-201ENST00000290417 NME9Q86XW9 330 aa31.52■■■□□ 2.64
GFRA4-201ENST00000290417 MYOM1P52179 1685 aa31.52■■■□□ 2.64
GFRA4-201ENST00000290417 CPDO75976 1380 aa31.52■■■□□ 2.64
GFRA4-201ENST00000290417 ANKRD36BQ8N2N9 1353 aa31.52■■■□□ 2.64
GFRA4-201ENST00000290417 GLI3P10071 1580 aa31.51■■■□□ 2.64
GFRA4-201ENST00000290417 ZRANB1Q9UGI0 708 aa31.5■■■□□ 2.63
GFRA4-201ENST00000290417 ZBTB7CA1YPR0 619 aa31.49■■■□□ 2.63
GFRA4-201ENST00000290417 USP54Q70EL1 1684 aa31.49■■■□□ 2.63
GFRA4-201ENST00000290417 SOX12O15370 315 aa31.49■■■□□ 2.63
GFRA4-201ENST00000290417 POLR3GLQ9BT43 218 aa31.49■■■□□ 2.63
GFRA4-201ENST00000290417 USP31Q70CQ4 1352 aa31.47■■■□□ 2.63
GFRA4-201ENST00000290417 LMO7Q8WWI1 1683 aa31.47■■■□□ 2.63
GFRA4-201ENST00000290417 KCNH5Q8NCM2 988 aa31.46■■■□□ 2.63
GFRA4-201ENST00000290417 STRN4Q9NRL3 753 aa31.44■■■□□ 2.62
GFRA4-201ENST00000290417 CAMTA1Q9Y6Y1 1673 aa31.44■■■□□ 2.62
GFRA4-201ENST00000290417 NFAT5O94916 1531 aa31.43■■■□□ 2.62
GFRA4-201ENST00000290417 EVA1CP58658 441 aa31.41■■■□□ 2.62
GFRA4-201ENST00000290417 COL18A1P39060 1754 aa31.39■■■□□ 2.62
GFRA4-201ENST00000290417 AATKQ6ZMQ8 1374 aa31.39■■■□□ 2.61
GFRA4-201ENST00000290417 OVOS2A0A0J9YW53 1432 aa31.38■■■□□ 2.61
GFRA4-201ENST00000290417 OVOS2Q6IE36 1432 aa31.38■■■□□ 2.61
GFRA4-201ENST00000290417 ARHGEF25Q86VW2 580 aa31.38■■■□□ 2.61
GFRA4-201ENST00000290417 SPATA31A5Q5VU36 1347 aa31.37■■■□□ 2.61
GFRA4-201ENST00000290417 SPATA31A7Q8IWB4 1347 aa31.37■■■□□ 2.61
GFRA4-201ENST00000290417 RGPD5Q99666 1765 aa31.37■■■□□ 2.61
GFRA4-201ENST00000290417 LTN1O94822 1766 aa31.36■■■□□ 2.61
GFRA4-201ENST00000290417 KIF20BQ96Q89 1820 aa31.36■■■□□ 2.61
GFRA4-201ENST00000290417 COG3Q96JB2 828 aa31.35■■■□□ 2.61
GFRA4-201ENST00000290417 BRWD3Q6RI45 1802 aa31.35■■■□□ 2.61
GFRA4-201ENST00000290417 COL5A2P05997 1499 aaPredicted RBP31.35■■■□□ 2.61
GFRA4-201ENST00000290417 C11orf95C9JLR9 678 aaPredicted RBP31.34■■■□□ 2.61
GFRA4-201ENST00000290417 FAM98CQ17RN3 349 aaKnown RBP31.34■■■□□ 2.61
GFRA4-201ENST00000290417 LARP1Q6PKG0 1096 aaKnown RBP31.33■■■□□ 2.61
GFRA4-201ENST00000290417 SEPT12Q8IYM1 358 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms