RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
SNF8-201ENST00000290330 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
SNF8-201ENST00000290330 ITSN1Q15811 1721 aa15.01□□□□□ -0.01
SNF8-201ENST00000290330 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
SNF8-201ENST00000290330 VPS72Q15906 364 aa15.01□□□□□ -0.01
SNF8-201ENST00000290330 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
SNF8-201ENST00000290330 CABP2Q9NPB3 220 aa15□□□□□ -0.01
SNF8-201ENST00000290330 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
SNF8-201ENST00000290330 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
SNF8-201ENST00000290330 TRPM1Q7Z4N2 1603 aa14.99□□□□□ -0.01
SNF8-201ENST00000290330 GLI3P10071 1580 aa14.99□□□□□ -0.01
SNF8-201ENST00000290330 BTG4Q9NY30 223 aa14.98□□□□□ -0.01
SNF8-201ENST00000290330 PPIP5K1Q6PFW1 1433 aa14.98□□□□□ -0.01
SNF8-201ENST00000290330 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
SNF8-201ENST00000290330 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
SNF8-201ENST00000290330 ONECUT3O60422 494 aaPredicted RBP14.97□□□□□ -0.01
SNF8-201ENST00000290330 NUTM2GQ5VZR2 741 aa14.97□□□□□ -0.01
SNF8-201ENST00000290330 CCDC9Q9Y3X0 531 aaKnown RBP14.97□□□□□ -0.01
SNF8-201ENST00000290330 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
SNF8-201ENST00000290330 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
SNF8-201ENST00000290330 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
SNF8-201ENST00000290330 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
SNF8-201ENST00000290330 SEPT12Q8IYM1 358 aa14.95□□□□□ -0.02
SNF8-201ENST00000290330 ABTB2Q8N961 1025 aa14.95□□□□□ -0.02
SNF8-201ENST00000290330 PRDM11Q9NQV5 511 aa14.95□□□□□ -0.02
SNF8-201ENST00000290330 KIAA0232Q92628 1395 aa14.94□□□□□ -0.02
SNF8-201ENST00000290330 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
SNF8-201ENST00000290330 COL14A1Q05707 1796 aaKnown RBP14.93□□□□□ -0.02
SNF8-201ENST00000290330 ZC3H6P61129 1189 aaKnown RBP14.93□□□□□ -0.02
SNF8-201ENST00000290330 CHRNA2Q15822 529 aa14.92□□□□□ -0.02
SNF8-201ENST00000290330 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
SNF8-201ENST00000290330 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
SNF8-201ENST00000290330 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
SNF8-201ENST00000290330 NRAPQ86VF7 1730 aa14.92□□□□□ -0.02
SNF8-201ENST00000290330 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
SNF8-201ENST00000290330 USP6P35125 1406 aa14.91□□□□□ -0.02
SNF8-201ENST00000290330 USP19O94966 1318 aa14.91□□□□□ -0.02
SNF8-201ENST00000290330 SPATA31A5Q5VU36 1347 aa14.91□□□□□ -0.02
SNF8-201ENST00000290330 SPATA31A7Q8IWB4 1347 aa14.91□□□□□ -0.02
SNF8-201ENST00000290330 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
SNF8-201ENST00000290330 PHRF1Q9P1Y6 1649 aaKnown RBP14.9□□□□□ -0.02
SNF8-201ENST00000290330 GCP02774 474 aa14.89□□□□□ -0.03
SNF8-201ENST00000290330 KRT27Q7Z3Y8 459 aa14.89□□□□□ -0.03
SNF8-201ENST00000290330 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
SNF8-201ENST00000290330 CPDO75976 1380 aa14.88□□□□□ -0.03
SNF8-201ENST00000290330 SBNO2Q9Y2G9 1366 aa14.88□□□□□ -0.03
SNF8-201ENST00000290330 A0A0G2JS52 829 aa14.88□□□□□ -0.03
SNF8-201ENST00000290330 MYT1Q01538 1121 aa14.88□□□□□ -0.03
SNF8-201ENST00000290330 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
SNF8-201ENST00000290330 BRWD3Q6RI45 1802 aa14.87□□□□□ -0.03
SNF8-201ENST00000290330 NRKQ7Z2Y5 1582 aa14.87□□□□□ -0.03
SNF8-201ENST00000290330 NLRP6P59044 892 aa14.87□□□□□ -0.03
SNF8-201ENST00000290330 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
SNF8-201ENST00000290330 SPATA31A1Q5TZJ5 1347 aa14.87□□□□□ -0.03
SNF8-201ENST00000290330 BLMP54132 1417 aaPredicted RBP14.86□□□□□ -0.03
SNF8-201ENST00000290330 EP400Q96L91 3159 aa14.85□□□□□ -0.03
SNF8-201ENST00000290330 EVA1CP58658 441 aa14.85□□□□□ -0.03
SNF8-201ENST00000290330 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
SNF8-201ENST00000290330 CAMTA1Q9Y6Y1 1673 aa14.84□□□□□ -0.03
SNF8-201ENST00000290330 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
SNF8-201ENST00000290330 LARP1Q6PKG0 1096 aaKnown RBP14.83□□□□□ -0.04
SNF8-201ENST00000290330 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
SNF8-201ENST00000290330 USP35Q9P2H5 1018 aa14.82□□□□□ -0.04
SNF8-201ENST00000290330 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
SNF8-201ENST00000290330 KTN1Q86UP2 1357 aaKnown RBP14.82□□□□□ -0.04
SNF8-201ENST00000290330 SLIT3O75094 1523 aa14.82□□□□□ -0.04
SNF8-201ENST00000290330 LMO7Q8WWI1 1683 aa14.81□□□□□ -0.04
SNF8-201ENST00000290330 THSD7AQ9UPZ6 1657 aa14.81□□□□□ -0.04
SNF8-201ENST00000290330 SF3B2Q13435 895 aaKnown RBP14.81□□□□□ -0.04
SNF8-201ENST00000290330 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
SNF8-201ENST00000290330 BARGINQ6ZT62 677 aa14.81□□□□□ -0.04
SNF8-201ENST00000290330 PIK3C2AO00443 1686 aa14.81□□□□□ -0.04
SNF8-201ENST00000290330 TESK2Q96S53 571 aa14.8□□□□□ -0.04
SNF8-201ENST00000290330 AATKQ6ZMQ8 1374 aa14.8□□□□□ -0.04
SNF8-201ENST00000290330 ST20-MTHFSA0A0A6YYL1 179 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 COL5A2P05997 1499 aaPredicted RBP14.79□□□□□ -0.04
SNF8-201ENST00000290330 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 TCP11L2Q8N4U5 519 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 KCNH5Q8NCM2 988 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 PUS7Q96PZ0 661 aaKnown RBP14.79□□□□□ -0.04
SNF8-201ENST00000290330 SLC12A5Q9H2X9 1139 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
SNF8-201ENST00000290330 CD163L1Q9NR16 1453 aa14.78□□□□□ -0.04
SNF8-201ENST00000290330 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
SNF8-201ENST00000290330 THRAP3Q9Y2W1 955 aaKnown RBP14.78□□□□□ -0.04
SNF8-201ENST00000290330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNF8-201ENST00000290330 AXIN2Q9Y2T1 843 aa14.77□□□□□ -0.05
SNF8-201ENST00000290330 SOX12O15370 315 aa14.76□□□□□ -0.05
SNF8-201ENST00000290330 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
SNF8-201ENST00000290330 CRB1P82279 1406 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 USP31Q70CQ4 1352 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 BAG6P46379 1132 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 FAM196AQ6ZSG2 479 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 NME9Q86XW9 330 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 MON2Q7Z3U7 1717 aa14.75□□□□□ -0.05
SNF8-201ENST00000290330 PDE3BQ13370 1112 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms