RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.83
TPM1-202ENST00000288398 ATP7BP35670 1465 aa20.26■□□□□ 0.83
TPM1-202ENST00000288398 KRT27Q7Z3Y8 459 aa20.26■□□□□ 0.83
TPM1-202ENST00000288398 ALS2Q96Q42 1657 aa20.26■□□□□ 0.83
TPM1-202ENST00000288398 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
TPM1-202ENST00000288398 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
TPM1-202ENST00000288398 CCDC61Q9Y6R9 512 aa20.24■□□□□ 0.83
TPM1-202ENST00000288398 EP400Q96L91 3159 aa20.23■□□□□ 0.83
TPM1-202ENST00000288398 SRPK2P78362 688 aaKnown RBP20.23■□□□□ 0.83
TPM1-202ENST00000288398 FAM98CQ17RN3 349 aaKnown RBP20.23■□□□□ 0.83
TPM1-202ENST00000288398 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
TPM1-202ENST00000288398 ACEP12821 1306 aa20.21■□□□□ 0.83
TPM1-202ENST00000288398 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
TPM1-202ENST00000288398 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
TPM1-202ENST00000288398 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
TPM1-202ENST00000288398 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
TPM1-202ENST00000288398 NUTM2GQ5VZR2 741 aa20.19■□□□□ 0.82
TPM1-202ENST00000288398 NRAPQ86VF7 1730 aa20.19■□□□□ 0.82
TPM1-202ENST00000288398 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
TPM1-202ENST00000288398 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
TPM1-202ENST00000288398 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
TPM1-202ENST00000288398 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
TPM1-202ENST00000288398 STRN4Q9NRL3 753 aa20.17■□□□□ 0.82
TPM1-202ENST00000288398 SPATA31A5Q5VU36 1347 aa20.17■□□□□ 0.82
TPM1-202ENST00000288398 SPATA31A7Q8IWB4 1347 aa20.17■□□□□ 0.82
TPM1-202ENST00000288398 BAG6P46379 1132 aa20.16■□□□□ 0.82
TPM1-202ENST00000288398 EVA1CP58658 441 aa20.16■□□□□ 0.82
TPM1-202ENST00000288398 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
TPM1-202ENST00000288398 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
TPM1-202ENST00000288398 CHRNA2Q15822 529 aa20.15■□□□□ 0.82
TPM1-202ENST00000288398 PPIP5K1Q6PFW1 1433 aa20.15■□□□□ 0.82
TPM1-202ENST00000288398 TOPAZ1Q8N9V7 1692 aa20.15■□□□□ 0.82
TPM1-202ENST00000288398 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
TPM1-202ENST00000288398 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
TPM1-202ENST00000288398 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
TPM1-202ENST00000288398 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
TPM1-202ENST00000288398 CABP2Q9NPB3 220 aa20.13■□□□□ 0.81
TPM1-202ENST00000288398 PHRF1Q9P1Y6 1649 aaKnown RBP20.13■□□□□ 0.81
TPM1-202ENST00000288398 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
TPM1-202ENST00000288398 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
TPM1-202ENST00000288398 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
TPM1-202ENST00000288398 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
TPM1-202ENST00000288398 BRD4O60885 1362 aaPredicted RBP20.09■□□□□ 0.81
TPM1-202ENST00000288398 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
TPM1-202ENST00000288398 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.81
TPM1-202ENST00000288398 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.81
TPM1-202ENST00000288398 CABP1Q9NZU7 370 aa20.07■□□□□ 0.8
TPM1-202ENST00000288398 PDE3BQ13370 1112 aa20.06■□□□□ 0.8
TPM1-202ENST00000288398 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
TPM1-202ENST00000288398 NRKQ7Z2Y5 1582 aa20.06■□□□□ 0.8
TPM1-202ENST00000288398 CPDO75976 1380 aa20.06■□□□□ 0.8
TPM1-202ENST00000288398 USP19O94966 1318 aa20.05■□□□□ 0.8
TPM1-202ENST00000288398 SSH2Q76I76 1423 aa20.05■□□□□ 0.8
TPM1-202ENST00000288398 GCP02774 474 aa20.05■□□□□ 0.8
TPM1-202ENST00000288398 NLRP6P59044 892 aa20.05■□□□□ 0.8
TPM1-202ENST00000288398 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
TPM1-202ENST00000288398 FAM196AQ6ZSG2 479 aa20.04■□□□□ 0.8
TPM1-202ENST00000288398 RGPD1P0DJD0 1748 aa20.04■□□□□ 0.8
TPM1-202ENST00000288398 USP6P35125 1406 aa20.03■□□□□ 0.8
TPM1-202ENST00000288398 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
TPM1-202ENST00000288398 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
TPM1-202ENST00000288398 EN1Q05925 392 aaPredicted RBP20.02■□□□□ 0.8
TPM1-202ENST00000288398 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
TPM1-202ENST00000288398 BARGINQ6ZT62 677 aa20.02■□□□□ 0.8
TPM1-202ENST00000288398 SRCAPQ6ZRS2 3230 aa20.01■□□□□ 0.79
TPM1-202ENST00000288398 ZNF692Q9BU19 519 aaPredicted RBP20■□□□□ 0.79
TPM1-202ENST00000288398 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
TPM1-202ENST00000288398 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
TPM1-202ENST00000288398 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
TPM1-202ENST00000288398 TRIM37O94972 964 aa19.99■□□□□ 0.79
TPM1-202ENST00000288398 APBA3O96018 575 aa19.97■□□□□ 0.79
TPM1-202ENST00000288398 KCNH5Q8NCM2 988 aa19.96■□□□□ 0.79
TPM1-202ENST00000288398 COL5A2P05997 1499 aaPredicted RBP19.96■□□□□ 0.79
TPM1-202ENST00000288398 LMO7Q8WWI1 1683 aa19.96■□□□□ 0.79
TPM1-202ENST00000288398 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 CRB1P82279 1406 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 C11orf95C9JLR9 678 aaPredicted RBP19.95■□□□□ 0.78
TPM1-202ENST00000288398 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 CARD11Q9BXL7 1154 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
TPM1-202ENST00000288398 SOX12O15370 315 aa19.94■□□□□ 0.78
TPM1-202ENST00000288398 TTC21AQ8NDW8 1320 aa19.94■□□□□ 0.78
TPM1-202ENST00000288398 SLIT3O75094 1523 aa19.93■□□□□ 0.78
TPM1-202ENST00000288398 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
TPM1-202ENST00000288398 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
TPM1-202ENST00000288398 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
TPM1-202ENST00000288398 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
TPM1-202ENST00000288398 CSB-PGBD3P0DP91 1061 aa19.92■□□□□ 0.78
TPM1-202ENST00000288398 R3HDM1Q15032 1099 aaKnown RBP19.92■□□□□ 0.78
TPM1-202ENST00000288398 TNS1Q9HBL0 1735 aaKnown RBP19.92■□□□□ 0.78
TPM1-202ENST00000288398 PIK3C2AO00443 1686 aa19.91■□□□□ 0.78
TPM1-202ENST00000288398 CPSF1Q10570 1443 aaKnown RBP19.89■□□□□ 0.77
TPM1-202ENST00000288398 DDB1Q16531 1140 aa19.89■□□□□ 0.77
TPM1-202ENST00000288398 NBPF14Q5TI25 921 aa19.89■□□□□ 0.77
TPM1-202ENST00000288398 TMC1Q8TDI8 760 aa19.89■□□□□ 0.77
TPM1-202ENST00000288398 LRP5O75197 1615 aa19.88■□□□□ 0.77
TPM1-202ENST00000288398 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
TPM1-202ENST00000288398 WDR17Q8IZU2 1322 aa19.88■□□□□ 0.77
TPM1-202ENST00000288398 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms