RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
TRIM42-201ENST00000286349 POGKQ9P215 609 aa9.95□□□□□ -0.82
TRIM42-201ENST00000286349 CPS1P31327 1500 aa9.95□□□□□ -0.82
TRIM42-201ENST00000286349 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
TRIM42-201ENST00000286349 NAP1L2Q9ULW6 460 aaPredicted RBP9.95□□□□□ -0.82
TRIM42-201ENST00000286349 TMEM94Q12767 1356 aa9.95□□□□□ -0.82
TRIM42-201ENST00000286349 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
TRIM42-201ENST00000286349 PPP2R1AP30153 589 aa9.94□□□□□ -0.82
TRIM42-201ENST00000286349 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
TRIM42-201ENST00000286349 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
TRIM42-201ENST00000286349 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
TRIM42-201ENST00000286349 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
TRIM42-201ENST00000286349 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
TRIM42-201ENST00000286349 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.93□□□□□ -0.82
TRIM42-201ENST00000286349 NKTRP30414 1462 aaKnown RBP9.93□□□□□ -0.82
TRIM42-201ENST00000286349 RNF123Q5XPI4 1314 aa9.93□□□□□ -0.82
TRIM42-201ENST00000286349 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIM42-201ENST00000286349 USP32Q8NFA0 1604 aa9.92□□□□□ -0.82
TRIM42-201ENST00000286349 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
TRIM42-201ENST00000286349 CDK19Q9BWU1 502 aa9.91□□□□□ -0.82
TRIM42-201ENST00000286349 WASLO00401 505 aaPredicted RBP9.9□□□□□ -0.82
TRIM42-201ENST00000286349 MSH5O43196 834 aa9.9□□□□□ -0.82
TRIM42-201ENST00000286349 NGEFQ8N5V2 710 aa9.9□□□□□ -0.82
TRIM42-201ENST00000286349 IPO4Q8TEX9 1081 aaKnown RBP9.9□□□□□ -0.82
TRIM42-201ENST00000286349 C19orf44Q9H6X5 657 aa9.9□□□□□ -0.82
TRIM42-201ENST00000286349 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.82
TRIM42-201ENST00000286349 NSD2O96028 1365 aa9.9□□□□□ -0.82
TRIM42-201ENST00000286349 IL27Q8NEV9 243 aa9.9□□□□□ -0.83
TRIM42-201ENST00000286349 CABP2Q9NPB3 220 aa9.9□□□□□ -0.83
TRIM42-201ENST00000286349 TULP4Q9NRJ4 1543 aa9.89□□□□□ -0.83
TRIM42-201ENST00000286349 ADGRL3Q9HAR2 1447 aa9.89□□□□□ -0.83
TRIM42-201ENST00000286349 XIRP1Q702N8 1843 aaKnown RBP9.89□□□□□ -0.83
TRIM42-201ENST00000286349 PRR36Q9H6K5 1346 aa9.89□□□□□ -0.83
TRIM42-201ENST00000286349 NUTM2FA1L443 756 aa9.89□□□□□ -0.83
TRIM42-201ENST00000286349 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
TRIM42-201ENST00000286349 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
TRIM42-201ENST00000286349 ATAD2Q6PL18 1390 aa9.88□□□□□ -0.83
TRIM42-201ENST00000286349 CGNL1Q0VF96 1302 aa9.88□□□□□ -0.83
TRIM42-201ENST00000286349 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
TRIM42-201ENST00000286349 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
TRIM42-201ENST00000286349 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
TRIM42-201ENST00000286349 NALCNQ8IZF0 1738 aa9.87□□□□□ -0.83
TRIM42-201ENST00000286349 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
TRIM42-201ENST00000286349 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
TRIM42-201ENST00000286349 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
TRIM42-201ENST00000286349 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
TRIM42-201ENST00000286349 IRX6P78412 446 aaPredicted RBP9.86□□□□□ -0.83
TRIM42-201ENST00000286349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIM42-201ENST00000286349 TEX2Q8IWB9 1127 aa9.86□□□□□ -0.83
TRIM42-201ENST00000286349 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
TRIM42-201ENST00000286349 SRPK2P78362 688 aaKnown RBP9.85□□□□□ -0.83
TRIM42-201ENST00000286349 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
TRIM42-201ENST00000286349 ORAI2Q96SN7 254 aa9.85□□□□□ -0.83
TRIM42-201ENST00000286349 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
TRIM42-201ENST00000286349 MSH6P52701 1360 aa9.85□□□□□ -0.83
TRIM42-201ENST00000286349 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
TRIM42-201ENST00000286349 ATF3P18847 181 aa9.84□□□□□ -0.83
TRIM42-201ENST00000286349 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
TRIM42-201ENST00000286349 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
TRIM42-201ENST00000286349 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
TRIM42-201ENST00000286349 MST1RQ04912 1400 aa9.84□□□□□ -0.83
TRIM42-201ENST00000286349 CDC42BPGQ6DT37 1551 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 DCCP43146 1447 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 ATP7BP35670 1465 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 C1orf167Q5SNV9 1468 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
TRIM42-201ENST00000286349 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
TRIM42-201ENST00000286349 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
TRIM42-201ENST00000286349 PMFBP1Q8TBY8 1022 aa9.82□□□□□ -0.84
TRIM42-201ENST00000286349 ZFP91Q96JP5 570 aaPredicted RBP9.82□□□□□ -0.84
TRIM42-201ENST00000286349 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 DDX17Q92841 729 aaKnown RBP9.81□□□□□ -0.84
TRIM42-201ENST00000286349 ZNF521Q96K83 1311 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 ANKARQ7Z5J8 1434 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 FMN2Q9NZ56 1722 aa9.81□□□□□ -0.84
TRIM42-201ENST00000286349 CD163L1Q9NR16 1453 aa9.8□□□□□ -0.84
TRIM42-201ENST00000286349 HDGFL2Q7Z4V5 671 aaPredicted RBP9.8□□□□□ -0.84
TRIM42-201ENST00000286349 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
TRIM42-201ENST00000286349 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
TRIM42-201ENST00000286349 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
TRIM42-201ENST00000286349 UBAP1LF5GYI3 381 aa9.79□□□□□ -0.84
TRIM42-201ENST00000286349 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
TRIM42-201ENST00000286349 ACEP12821 1306 aa9.79□□□□□ -0.84
TRIM42-201ENST00000286349 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
TRIM42-201ENST00000286349 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
TRIM42-201ENST00000286349 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
TRIM42-201ENST00000286349 CPSF1Q10570 1443 aaKnown RBP9.78□□□□□ -0.84
TRIM42-201ENST00000286349 FOXO3O43524 673 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 CHMP4BQ9H444 224 aaKnown RBP9.78□□□□□ -0.84
TRIM42-201ENST00000286349 ANKRD26Q9UPS8 1709 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 E9PSI1 815 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 TOM1O60784 492 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 NCLP19338 710 aaKnown RBP9.78□□□□□ -0.84
TRIM42-201ENST00000286349 PIP4K2BP78356 416 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
TRIM42-201ENST00000286349 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms