RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 POLKQ9UBT6 870 aa11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 MROH1Q8NDA8 1641 aa11.63□□□□□ -0.55
CCDC144B-201ENST00000285176 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-201ENST00000285176 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
CCDC144B-201ENST00000285176 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-201ENST00000285176 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
CCDC144B-201ENST00000285176 SKAP1Q86WV1 359 aa11.62□□□□□ -0.55
CCDC144B-201ENST00000285176 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
CCDC144B-201ENST00000285176 DMRT2Q9Y5R5 561 aa11.61□□□□□ -0.55
CCDC144B-201ENST00000285176 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
CCDC144B-201ENST00000285176 SYNMO15061 1565 aa11.61□□□□□ -0.55
CCDC144B-201ENST00000285176 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
CCDC144B-201ENST00000285176 ITPRIPQ8IWB1 547 aa11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 PANK1Q8TE04 598 aa11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 SETD1BQ9UPS6 1966 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 CRBNQ96SW2 442 aa11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
CCDC144B-201ENST00000285176 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 TRPM1Q7Z4N2 1603 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 C20orf194Q5TEA3 1177 aa11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
CCDC144B-201ENST00000285176 ABCC11Q96J66 1382 aa11.58□□□□□ -0.55
CCDC144B-201ENST00000285176 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 UPF2Q9HAU5 1272 aaKnown RBP11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
CCDC144B-201ENST00000285176 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
CCDC144B-201ENST00000285176 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
CCDC144B-201ENST00000285176 MYOM2P54296 1465 aa11.57□□□□□ -0.56
CCDC144B-201ENST00000285176 E9PSI1 815 aa11.57□□□□□ -0.56
CCDC144B-201ENST00000285176 NBR1Q14596 966 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 MAP3K19Q56UN5 1328 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 TEFQ10587 303 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
CCDC144B-201ENST00000285176 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 HSP90AA1P07900 732 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 EIF4A2Q14240 407 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 ALKQ9UM73 1620 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 LMTK2Q8IWU2 1503 aa11.55□□□□□ -0.56
CCDC144B-201ENST00000285176 MPRIPQ6WCQ1 1025 aa11.54□□□□□ -0.56
CCDC144B-201ENST00000285176 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
CCDC144B-201ENST00000285176 NEXMIFQ5QGS0 1516 aa11.54□□□□□ -0.56
CCDC144B-201ENST00000285176 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
CCDC144B-201ENST00000285176 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 MSH6P52701 1360 aa11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 UBAP1LF5GYI3 381 aa11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 GCP02774 474 aa11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
CCDC144B-201ENST00000285176 VWDEQ8N2E2 1590 aa11.52□□□□□ -0.56
CCDC144B-201ENST00000285176 TNNQ9UQP3 1299 aa11.52□□□□□ -0.56
CCDC144B-201ENST00000285176 DEPDC5O75140 1603 aa11.52□□□□□ -0.56
CCDC144B-201ENST00000285176 ZMYM4Q5VZL5 1548 aa11.52□□□□□ -0.56
CCDC144B-201ENST00000285176 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
CCDC144B-201ENST00000285176 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
CCDC144B-201ENST00000285176 NLRP1Q9C000 1473 aa11.52□□□□□ -0.57
CCDC144B-201ENST00000285176 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
CCDC144B-201ENST00000285176 EYA1Q99502 592 aa11.51□□□□□ -0.57
CCDC144B-201ENST00000285176 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
CCDC144B-201ENST00000285176 AGLP35573 1532 aa11.5□□□□□ -0.57
CCDC144B-201ENST00000285176 FCHSD2O94868 740 aa11.5□□□□□ -0.57
CCDC144B-201ENST00000285176 ANXA1P04083 346 aa11.5□□□□□ -0.57
CCDC144B-201ENST00000285176 PTPRMP28827 1452 aa11.5□□□□□ -0.57
CCDC144B-201ENST00000285176 SLFN5Q08AF3 891 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 ANKRD24Q8TF21 1146 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
CCDC144B-201ENST00000285176 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
CCDC144B-201ENST00000285176 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-201ENST00000285176 PTCD1O75127 700 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-201ENST00000285176 LMOD3Q0VAK6 560 aa11.48□□□□□ -0.57
CCDC144B-201ENST00000285176 TWISTNBQ3B726 338 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-201ENST00000285176 FKBP5Q13451 457 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms