RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
SPOCK1-201ENST00000282223 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
SPOCK1-201ENST00000282223 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
SPOCK1-201ENST00000282223 PYCARDQ9ULZ3 195 aa9.35□□□□□ -0.91
SPOCK1-201ENST00000282223 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 RARSP54136 660 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 MVPQ14764 893 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 SART3Q15020 963 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 RABEP1Q15276 862 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 CAMK4Q16566 473 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 EIF3AQ14152 1382 aaKnown RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 ZNF644Q9H582 1327 aaPredicted RBP9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 GYS2P54840 703 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 MNS1Q8NEH6 495 aa9.34□□□□□ -0.91
SPOCK1-201ENST00000282223 ANKRD65E5RJM6 399 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 ZRSR1Q15695 479 aaKnown RBP9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 CHD1LQ86WJ1 897 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 SNX21Q969T3 373 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 PDLIM2Q96JY6 352 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 VPS37CA5D8V6 355 aaPredicted RBP9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 ELF2Q15723 593 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 UPF3BQ9BZI7 483 aaKnown RBP9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 LRRFIP2Q9Y608 721 aaKnown RBP9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 CDC45O75419 566 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 LRMPQ12912 555 aa9.33□□□□□ -0.92
SPOCK1-201ENST00000282223 GOLGA6L19H0YKK7 550 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 PTPN14Q15678 1187 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 TRIM66O15016 1216 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 IPO8O15397 1037 aaKnown RBP9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 BECN2A8MW95 431 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 SLFN14P0C7P3 912 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 HSP90AB3PQ58FF7 597 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 LEKR1Q6ZMV7 388 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 SRRTQ9BXP5 876 aaKnown RBP9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
SPOCK1-201ENST00000282223 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 ARGLU1Q9NWB6 273 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 NRDCO43847 1150 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 GADD45BO75293 160 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 NCBP1Q09161 790 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 NUP155O75694 1391 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 CAPN2P17655 700 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 TDO2P48775 406 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 TPM4P67936 248 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 BMS1Q14692 1282 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 CEP135Q66GS9 1140 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 TMCO3Q6UWJ1 677 aa9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 CWC22Q9HCG8 908 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 ZNF215Q9UL58 517 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-201ENST00000282223 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 MCCP23508 829 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 CCDC34Q96HJ3 373 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 MNAT1P51948 309 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 UBXN4Q92575 508 aa9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 MYCBPQ99417 103 aaPredicted RBP9.3□□□□□ -0.92
SPOCK1-201ENST00000282223 SYT10Q6XYQ8 523 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 CTNNA3Q9UI47 895 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 AK7Q96M32 723 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 FMNL2Q96PY5 1086 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
SPOCK1-201ENST00000282223 TPM3P06753 285 aa9.28□□□□□ -0.92
SPOCK1-201ENST00000282223 KDM4AO75164 1064 aa9.28□□□□□ -0.92
SPOCK1-201ENST00000282223 TTC31Q49AM3 519 aaPredicted RBP9.28□□□□□ -0.92
SPOCK1-201ENST00000282223 KIF18AQ8NI77 898 aa9.28□□□□□ -0.92
SPOCK1-201ENST00000282223 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
SPOCK1-201ENST00000282223 SMTNL1A8MU46 457 aa9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 CCDC192P0DO97 292 aa9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 ZSCAN26Q16670 478 aa9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 INTS3Q68E01 1043 aaKnown RBP9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 FERMT3Q86UX7 667 aa9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.92
SPOCK1-201ENST00000282223 H0YHG0 523 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 REC8O95072 547 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 BICD2Q8TD16 824 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 ZSWIM4Q9H7M6 989 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 ERCC6LQ2NKX8 1250 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 ARHGAP29Q52LW3 1261 aa9.27□□□□□ -0.93
SPOCK1-201ENST00000282223 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms