RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 SH3BP1Q9Y3L3 701 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 RPS6KL1Q9Y6S9 549 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 EXOC5O00471 708 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 PRC1O43663 620 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 CCDC144BQ3MJ40 725 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 KCNB2Q92953 911 aa7.97□□□□□ -1.13
LIN7C-201ENST00000278193 PES1O00541 588 aaKnown RBP7.96□□□□□ -1.13
LIN7C-201ENST00000278193 ATL2Q8NHH9 583 aa7.96□□□□□ -1.13
LIN7C-201ENST00000278193 PRR12Q9ULL5 1215 aa7.96□□□□□ -1.13
LIN7C-201ENST00000278193 CT47B1P0C2W7 299 aaPredicted RBP7.96□□□□□ -1.14
LIN7C-201ENST00000278193 MPNDQ8N594 471 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 JDP2Q8WYK2 163 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.96□□□□□ -1.14
LIN7C-201ENST00000278193 CCDC88BA6NC98 1476 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 NAP1L1P55209 391 aaKnown RBP7.96□□□□□ -1.14
LIN7C-201ENST00000278193 KIAA2012Q0VF49 1180 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 ICE2Q659A1 982 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 POU5F1Q01860 360 aaKnown RBP7.96□□□□□ -1.14
LIN7C-201ENST00000278193 SPACA7Q96KW9 195 aa7.96□□□□□ -1.14
LIN7C-201ENST00000278193 RSPH9Q9H1X1 276 aaPredicted RBP7.96□□□□□ -1.14
LIN7C-201ENST00000278193 CUX2O14529 1486 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 HMMRO75330 724 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 POLR3EQ9NVU0 708 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 BSDC1Q9NW68 430 aaPredicted RBP7.95□□□□□ -1.14
LIN7C-201ENST00000278193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.95□□□□□ -1.14
LIN7C-201ENST00000278193 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 CCDC34Q96HJ3 373 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
LIN7C-201ENST00000278193 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
LIN7C-201ENST00000278193 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
LIN7C-201ENST00000278193 DNTTIP2Q5QJE6 756 aaKnown RBP7.94□□□□□ -1.14
LIN7C-201ENST00000278193 PARP9Q8IXQ6 854 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 SPC25Q9HBM1 224 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 HMGXB3Q12766 1538 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 MAF1Q9H063 256 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 PRKAG2Q9UGJ0 569 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 CEP89Q96ST8 783 aa7.94□□□□□ -1.14
LIN7C-201ENST00000278193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.94□□□□□ -1.142e-8■■□□□ 12.5
LIN7C-201ENST00000278193 PPP1R12AO14974 1030 aaPredicted RBP7.94□□□□□ -1.14
LIN7C-201ENST00000278193 MAP3K20Q9NYL2 800 aaKnown RBP7.94□□□□□ -1.14
LIN7C-201ENST00000278193 SCP2P22307 547 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 BDNFP23560 247 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 PDE6BP35913 854 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 MKRN4PQ13434 485 aaPredicted RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 CAPN10Q9HC96 672 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 HSP90AB1P08238 724 aaKnown RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 DNAJA1P31689 397 aaKnown RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 CD53P19397 219 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 GYS2P54840 703 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 LARGE2Q8N3Y3 721 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 RPGRIP1LQ68CZ1 1315 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 NUTM2FA1L443 756 aa7.93□□□□□ -1.14
LIN7C-201ENST00000278193 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 PDAP1Q13442 181 aaKnown RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 RBM28Q9NW13 759 aaKnown RBP7.93□□□□□ -1.14
LIN7C-201ENST00000278193 TDRD9Q8NDG6 1382 aaKnown RBP7.92□□□□□ -1.14
LIN7C-201ENST00000278193 PUS10Q3MIT2 529 aaKnown RBP7.92□□□□□ -1.14
LIN7C-201ENST00000278193 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
LIN7C-201ENST00000278193 TBC1D2Q9BYX2 928 aa7.92□□□□□ -1.14
LIN7C-201ENST00000278193 MRC2Q9UBG0 1479 aa7.92□□□□□ -1.14
LIN7C-201ENST00000278193 ATICP31939 592 aa7.92□□□□□ -1.14
LIN7C-201ENST00000278193 C4orf46Q504U0 113 aa7.92□□□□□ -1.14
LIN7C-201ENST00000278193 BMS1Q14692 1282 aaKnown RBP7.91□□□□□ -1.14
LIN7C-201ENST00000278193 CCDC174Q6PII3 467 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 HELBQ8NG08 1087 aaPredicted RBP7.91□□□□□ -1.14
LIN7C-201ENST00000278193 SCYL1Q96KG9 808 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 TBC1D12O60347 775 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 CCDC92Q53HC0 331 aaPredicted RBP7.91□□□□□ -1.14
LIN7C-201ENST00000278193 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
LIN7C-201ENST00000278193 SUDS3Q9H7L9 328 aaPredicted RBP7.91□□□□□ -1.14
LIN7C-201ENST00000278193 MS4A1P11836 297 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 CCDC102AQ96A19 550 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 CARMIL1Q5VZK9 1371 aa7.91□□□□□ -1.14
LIN7C-201ENST00000278193 DCAF8L1A6NGE4 600 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 GOPCQ9HD26 462 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 TSPY4P0CV99 314 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 TSPY10P0CW01 314 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 DRC7Q8IY82 874 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 BICRAQ9NZM4 1560 aa7.9□□□□□ -1.14
LIN7C-201ENST00000278193 FOSP01100 380 aaPredicted RBP7.9□□□□□ -1.15
LIN7C-201ENST00000278193 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 POM121CA8CG34 1229 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 SPDYE6P0CI01 402 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 GNL2Q13823 731 aaKnown RBP7.9□□□□□ -1.15
LIN7C-201ENST00000278193 SPDYE2Q495Y8 402 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 LCA5Q86VQ0 697 aa7.9□□□□□ -1.15
LIN7C-201ENST00000278193 MMP14P50281 582 aa7.89□□□□□ -1.15
LIN7C-201ENST00000278193 PSME1Q06323 249 aa7.89□□□□□ -1.15
LIN7C-201ENST00000278193 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
LIN7C-201ENST00000278193 TTC30BQ8N4P2 665 aa7.89□□□□□ -1.15
LIN7C-201ENST00000278193 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms