RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
LCN2-201ENST00000277480 NSD2O96028 1365 aa13.79□□□□□ -0.2
LCN2-201ENST00000277480 PPP2R1AP30153 589 aa13.77□□□□□ -0.21
LCN2-201ENST00000277480 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
LCN2-201ENST00000277480 FOXO3O43524 673 aa13.76□□□□□ -0.21
LCN2-201ENST00000277480 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
LCN2-201ENST00000277480 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
LCN2-201ENST00000277480 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
LCN2-201ENST00000277480 KIF20BQ96Q89 1820 aa13.76□□□□□ -0.21
LCN2-201ENST00000277480 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
LCN2-201ENST00000277480 TTC21AQ8NDW8 1320 aa13.75□□□□□ -0.21
LCN2-201ENST00000277480 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
LCN2-201ENST00000277480 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
LCN2-201ENST00000277480 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
LCN2-201ENST00000277480 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
LCN2-201ENST00000277480 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
LCN2-201ENST00000277480 PSME1Q06323 249 aa13.74□□□□□ -0.21
LCN2-201ENST00000277480 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
LCN2-201ENST00000277480 USP31Q70CQ4 1352 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 FBLN1P23142 703 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
LCN2-201ENST00000277480 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
LCN2-201ENST00000277480 PXDNQ92626 1479 aa13.72□□□□□ -0.21
LCN2-201ENST00000277480 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
LCN2-201ENST00000277480 COG3Q96JB2 828 aa13.71□□□□□ -0.21
LCN2-201ENST00000277480 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
LCN2-201ENST00000277480 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
LCN2-201ENST00000277480 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
LCN2-201ENST00000277480 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
LCN2-201ENST00000277480 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
LCN2-201ENST00000277480 MTHFSP49914 203 aa13.68□□□□□ -0.22
LCN2-201ENST00000277480 NLRP6P59044 892 aa13.68□□□□□ -0.22
LCN2-201ENST00000277480 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
LCN2-201ENST00000277480 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
LCN2-201ENST00000277480 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
LCN2-201ENST00000277480 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
LCN2-201ENST00000277480 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
LCN2-201ENST00000277480 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
LCN2-201ENST00000277480 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
LCN2-201ENST00000277480 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
LCN2-201ENST00000277480 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
LCN2-201ENST00000277480 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
LCN2-201ENST00000277480 IQSEC2Q5JU85 1478 aa13.66□□□□□ -0.22
LCN2-201ENST00000277480 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
LCN2-201ENST00000277480 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
LCN2-201ENST00000277480 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
LCN2-201ENST00000277480 CERKQ8TCT0 537 aa13.65□□□□□ -0.22
LCN2-201ENST00000277480 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
LCN2-201ENST00000277480 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
LCN2-201ENST00000277480 USP19O94966 1318 aa13.64□□□□□ -0.23
LCN2-201ENST00000277480 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
LCN2-201ENST00000277480 SOX12O15370 315 aa13.64□□□□□ -0.23
LCN2-201ENST00000277480 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
LCN2-201ENST00000277480 SLIT3O75094 1523 aa13.64□□□□□ -0.23
LCN2-201ENST00000277480 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
LCN2-201ENST00000277480 LMOD2Q6P5Q4 547 aa13.63□□□□□ -0.23
LCN2-201ENST00000277480 NFAT5O94916 1531 aa13.63□□□□□ -0.23
LCN2-201ENST00000277480 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
LCN2-201ENST00000277480 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
LCN2-201ENST00000277480 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
LCN2-201ENST00000277480 MAP3K19Q56UN5 1328 aa13.62□□□□□ -0.23
LCN2-201ENST00000277480 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 INSRP06213 1382 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 TOM1O60784 492 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
LCN2-201ENST00000277480 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
LCN2-201ENST00000277480 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
LCN2-201ENST00000277480 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
LCN2-201ENST00000277480 GCP02774 474 aa13.59□□□□□ -0.23
LCN2-201ENST00000277480 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
LCN2-201ENST00000277480 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
LCN2-201ENST00000277480 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
LCN2-201ENST00000277480 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
LCN2-201ENST00000277480 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
LCN2-201ENST00000277480 IL13P35225 146 aa13.57□□□□□ -0.24
LCN2-201ENST00000277480 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
LCN2-201ENST00000277480 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
LCN2-201ENST00000277480 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
LCN2-201ENST00000277480 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
LCN2-201ENST00000277480 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
LCN2-201ENST00000277480 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
LCN2-201ENST00000277480 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
LCN2-201ENST00000277480 HOXC9P31274 260 aa13.55□□□□□ -0.24
LCN2-201ENST00000277480 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
LCN2-201ENST00000277480 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
LCN2-201ENST00000277480 FLT4P35916 1363 aa13.55□□□□□ -0.24
LCN2-201ENST00000277480 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
LCN2-201ENST00000277480 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
LCN2-201ENST00000277480 AMPHP49418 695 aa13.54□□□□□ -0.24
LCN2-201ENST00000277480 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
LCN2-201ENST00000277480 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
LCN2-201ENST00000277480 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
LCN2-201ENST00000277480 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
LCN2-201ENST00000277480 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
LCN2-201ENST00000277480 IP6K1Q92551 441 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms