RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 SMC4Q9NTJ3 1288 aa12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 TRIM27P14373 513 aa12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 CFAP53Q96M91 514 aa12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
CHRNA6-201ENST00000276410 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
CHRNA6-201ENST00000276410 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 MLECQ14165 292 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 CCDC27Q2M243 656 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
CHRNA6-201ENST00000276410 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
CHRNA6-201ENST00000276410 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHRNA6-201ENST00000276410 MCM4P33991 863 aa12.59□□□□□ -0.39
CHRNA6-201ENST00000276410 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
CHRNA6-201ENST00000276410 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
CHRNA6-201ENST00000276410 PTPRMP28827 1452 aa12.58□□□□□ -0.4
CHRNA6-201ENST00000276410 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
CHRNA6-201ENST00000276410 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
CHRNA6-201ENST00000276410 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
CHRNA6-201ENST00000276410 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
CHRNA6-201ENST00000276410 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
CHRNA6-201ENST00000276410 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
CHRNA6-201ENST00000276410 AAMPQ13685 434 aa12.56□□□□□ -0.4
CHRNA6-201ENST00000276410 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
CHRNA6-201ENST00000276410 NSD2O96028 1365 aa12.55□□□□□ -0.4
CHRNA6-201ENST00000276410 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
CHRNA6-201ENST00000276410 FBLN1P23142 703 aa12.55□□□□□ -0.4
CHRNA6-201ENST00000276410 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
CHRNA6-201ENST00000276410 LNPKQ9C0E8 428 aa12.55□□□□□ -0.4
CHRNA6-201ENST00000276410 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 FYB1O15117 783 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 TRAK2O60296 914 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
CHRNA6-201ENST00000276410 HDAC1Q13547 482 aaPredicted RBP12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 CHMP5Q9NZZ3 219 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
CHRNA6-201ENST00000276410 RIPK4P57078 832 aa12.52□□□□□ -0.4
CHRNA6-201ENST00000276410 SMC5Q8IY18 1101 aa12.52□□□□□ -0.4
CHRNA6-201ENST00000276410 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.4
CHRNA6-201ENST00000276410 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.4
CHRNA6-201ENST00000276410 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.4
CHRNA6-201ENST00000276410 COL3A1P02461 1466 aaPredicted RBP12.52□□□□□ -0.41
CHRNA6-201ENST00000276410 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
CHRNA6-201ENST00000276410 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
CHRNA6-201ENST00000276410 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
CHRNA6-201ENST00000276410 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
CHRNA6-201ENST00000276410 NUCB1Q02818 461 aa12.49□□□□□ -0.41
CHRNA6-201ENST00000276410 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 DDIT3P35638 169 aa12.48□□□□□ -0.41
CHRNA6-201ENST00000276410 DIAPH1O60610 1272 aaKnown RBP12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 KIF2CQ99661 725 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 A2ML1A8K2U0 1454 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
CHRNA6-201ENST00000276410 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
CHRNA6-201ENST00000276410 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
CHRNA6-201ENST00000276410 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.41
CHRNA6-201ENST00000276410 KIF16BQ96L93 1317 aa12.46□□□□□ -0.42
CHRNA6-201ENST00000276410 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.42
CHRNA6-201ENST00000276410 HMOX1P09601 288 aa12.46□□□□□ -0.42
CHRNA6-201ENST00000276410 PRKAR2BP31323 418 aa12.46□□□□□ -0.42
CHRNA6-201ENST00000276410 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.42
CHRNA6-201ENST00000276410 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
CHRNA6-201ENST00000276410 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms