RNA–Protein interactions for RNA: ENST00000275767.3

TMEM140-201, Transcript of transmembrane protein 140, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM140, Length 1,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140-201ENST00000275767 PIK3C2AO00443 1686 aa21.95■■□□□ 1.1
TMEM140-201ENST00000275767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.13e-7■■□□□ 12.3
TMEM140-201ENST00000275767 TTC21AQ8NDW8 1320 aa21.93■■□□□ 1.1
TMEM140-201ENST00000275767 USP54Q70EL1 1684 aa21.93■■□□□ 1.1
TMEM140-201ENST00000275767 TTC21BQ7Z4L5 1316 aa21.93■■□□□ 1.1
TMEM140-201ENST00000275767 NHSL1Q5SYE7 1610 aa21.93■■□□□ 1.1
TMEM140-201ENST00000275767 ROBO1Q9Y6N7 1651 aa21.93■■□□□ 1.1
TMEM140-201ENST00000275767 FOXO3O43524 673 aa21.92■■□□□ 1.1
TMEM140-201ENST00000275767 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
TMEM140-201ENST00000275767 FYB1O15117 783 aa21.92■■□□□ 1.1
TMEM140-201ENST00000275767 PSME1Q06323 249 aa21.92■■□□□ 1.1
TMEM140-201ENST00000275767 NPHP3Q7Z494 1330 aa21.91■■□□□ 1.1
TMEM140-201ENST00000275767 GGNBP2Q9H3C7 697 aa21.9■■□□□ 1.1
TMEM140-201ENST00000275767 MYBBP1AQ9BQG0 1328 aaKnown RBP21.9■■□□□ 1.1
TMEM140-201ENST00000275767 MARF1Q9Y4F3 1742 aaKnown RBP21.89■■□□□ 1.09
TMEM140-201ENST00000275767 ALS2Q96Q42 1657 aa21.89■■□□□ 1.09
TMEM140-201ENST00000275767 NME9Q86XW9 330 aa21.88■■□□□ 1.09
TMEM140-201ENST00000275767 PXDNQ92626 1479 aa21.88■■□□□ 1.09
TMEM140-201ENST00000275767 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
TMEM140-201ENST00000275767 OVOS2A0A0J9YW53 1432 aa21.87■■□□□ 1.09
TMEM140-201ENST00000275767 OVOS2Q6IE36 1432 aa21.87■■□□□ 1.09
TMEM140-201ENST00000275767 CCER2I3L3R5 266 aa21.86■■□□□ 1.09
TMEM140-201ENST00000275767 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
TMEM140-201ENST00000275767 KRT28Q7Z3Y7 464 aa21.85■■□□□ 1.09
TMEM140-201ENST00000275767 TOM1O60784 492 aa21.85■■□□□ 1.09
TMEM140-201ENST00000275767 XPCQ01831 940 aaPredicted RBP21.85■■□□□ 1.09
TMEM140-201ENST00000275767 COG3Q96JB2 828 aa21.85■■□□□ 1.09
TMEM140-201ENST00000275767 USP31Q70CQ4 1352 aa21.84■■□□□ 1.09
TMEM140-201ENST00000275767 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
TMEM140-201ENST00000275767 CERKQ8TCT0 537 aa21.83■■□□□ 1.09
TMEM140-201ENST00000275767 SBNO1A3KN83 1393 aa21.83■■□□□ 1.09
TMEM140-201ENST00000275767 NLRP13Q86W25 1043 aa21.83■■□□□ 1.08
TMEM140-201ENST00000275767 MAP2P11137 1827 aaKnown RBP21.82■■□□□ 1.08
TMEM140-201ENST00000275767 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
TMEM140-201ENST00000275767 ABTB2Q8N961 1025 aa21.82■■□□□ 1.08
TMEM140-201ENST00000275767 DDX17Q92841 729 aaKnown RBP21.82■■□□□ 1.08
TMEM140-201ENST00000275767 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
TMEM140-201ENST00000275767 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
TMEM140-201ENST00000275767 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
TMEM140-201ENST00000275767 SOS2Q07890 1332 aaPredicted RBP21.8■■□□□ 1.08
TMEM140-201ENST00000275767 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
TMEM140-201ENST00000275767 NLRP6P59044 892 aa21.79■■□□□ 1.08
TMEM140-201ENST00000275767 UBAP1LF5GYI3 381 aa21.78■■□□□ 1.08
TMEM140-201ENST00000275767 PHLPP1O60346 1717 aa21.78■■□□□ 1.08
TMEM140-201ENST00000275767 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
TMEM140-201ENST00000275767 ARHGEF10O15013 1369 aa21.77■■□□□ 1.07
TMEM140-201ENST00000275767 CRYBG1Q9Y4K1 1723 aa21.76■■□□□ 1.07
TMEM140-201ENST00000275767 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
TMEM140-201ENST00000275767 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
TMEM140-201ENST00000275767 SLIT3O75094 1523 aa21.76■■□□□ 1.07
TMEM140-201ENST00000275767 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
TMEM140-201ENST00000275767 SPATA31A3Q5VYP0 1347 aa21.75■■□□□ 1.07
TMEM140-201ENST00000275767 NUTM2GQ5VZR2 741 aa21.75■■□□□ 1.07
TMEM140-201ENST00000275767 LTN1O94822 1766 aa21.74■■□□□ 1.07
TMEM140-201ENST00000275767 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
TMEM140-201ENST00000275767 SMG6Q86US8 1419 aaKnown RBP21.74■■□□□ 1.07
TMEM140-201ENST00000275767 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
TMEM140-201ENST00000275767 PIP4K2BP78356 416 aa21.73■■□□□ 1.07
TMEM140-201ENST00000275767 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
TMEM140-201ENST00000275767 NFAT5O94916 1531 aa21.72■■□□□ 1.07
TMEM140-201ENST00000275767 ABCA3Q99758 1704 aa21.72■■□□□ 1.07
TMEM140-201ENST00000275767 USP19O94966 1318 aa21.72■■□□□ 1.07
TMEM140-201ENST00000275767 MTHFSP49914 203 aa21.7■■□□□ 1.07
TMEM140-201ENST00000275767 CDK12Q9NYV4 1490 aaPredicted RBP21.7■■□□□ 1.06
TMEM140-201ENST00000275767 KCNH5Q8NCM2 988 aa21.69■■□□□ 1.06
TMEM140-201ENST00000275767 PEAK1Q9H792 1746 aa21.69■■□□□ 1.06
TMEM140-201ENST00000275767 SOX12O15370 315 aa21.68■■□□□ 1.06
TMEM140-201ENST00000275767 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
TMEM140-201ENST00000275767 POLKQ9UBT6 870 aa21.68■■□□□ 1.06
TMEM140-201ENST00000275767 COL22A1Q8NFW1 1626 aaPredicted RBP21.67■■□□□ 1.06
TMEM140-201ENST00000275767 FBLN1P23142 703 aa21.67■■□□□ 1.06
TMEM140-201ENST00000275767 CFAP53Q96M91 514 aa21.67■■□□□ 1.06
TMEM140-201ENST00000275767 RRS1Q15050 365 aaKnown RBP21.67■■□□□ 1.06
TMEM140-201ENST00000275767 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
TMEM140-201ENST00000275767 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
TMEM140-201ENST00000275767 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
TMEM140-201ENST00000275767 KIF24Q5T7B8 1368 aa21.65■■□□□ 1.06
TMEM140-201ENST00000275767 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
TMEM140-201ENST00000275767 GCP02774 474 aa21.64■■□□□ 1.05
TMEM140-201ENST00000275767 MAP3K19Q56UN5 1328 aa21.64■■□□□ 1.05
TMEM140-201ENST00000275767 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
TMEM140-201ENST00000275767 INSRP06213 1382 aa21.63■■□□□ 1.05
TMEM140-201ENST00000275767 FLT4P35916 1363 aa21.63■■□□□ 1.05
TMEM140-201ENST00000275767 RTL1A6NKG5 1358 aa21.62■■□□□ 1.05
TMEM140-201ENST00000275767 PNISRQ8TF01 805 aaKnown RBP21.62■■□□□ 1.05
TMEM140-201ENST00000275767 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
TMEM140-201ENST00000275767 ABCC6O95255 1503 aa21.59■■□□□ 1.05
TMEM140-201ENST00000275767 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
TMEM140-201ENST00000275767 CABLES1Q8TDN4 633 aa21.59■■□□□ 1.05
TMEM140-201ENST00000275767 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
TMEM140-201ENST00000275767 AMPHP49418 695 aa21.58■■□□□ 1.05
TMEM140-201ENST00000275767 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
TMEM140-201ENST00000275767 ARHGEF25Q86VW2 580 aa21.57■■□□□ 1.04
TMEM140-201ENST00000275767 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
TMEM140-201ENST00000275767 CPDO75976 1380 aa21.56■■□□□ 1.04
TMEM140-201ENST00000275767 DIAPH1O60610 1272 aaKnown RBP21.56■■□□□ 1.04
TMEM140-201ENST00000275767 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
TMEM140-201ENST00000275767 COL18A1P39060 1754 aa21.55■■□□□ 1.04
TMEM140-201ENST00000275767 HOXC9P31274 260 aa21.55■■□□□ 1.04
TMEM140-201ENST00000275767 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms