RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TATP17735 454 aaPredicted RBP14.28□□□□□ -0.12
SHPRH-201ENST00000275233 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
SHPRH-201ENST00000275233 STK3Q13188 491 aa14.27□□□□□ -0.12
SHPRH-201ENST00000275233 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.12
SHPRH-201ENST00000275233 CDK19Q9BWU1 502 aa14.27□□□□□ -0.12
SHPRH-201ENST00000275233 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.12
SHPRH-201ENST00000275233 ANKRD50Q9ULJ7 1429 aa14.27□□□□□ -0.12
SHPRH-201ENST00000275233 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.12
SHPRH-201ENST00000275233 OFD1O75665 1012 aa14.27□□□□□ -0.13
SHPRH-201ENST00000275233 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
SHPRH-201ENST00000275233 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.13
SHPRH-201ENST00000275233 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
SHPRH-201ENST00000275233 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
SHPRH-201ENST00000275233 SMG6Q86US8 1419 aaKnown RBP14.27□□□□□ -0.13
SHPRH-201ENST00000275233 PSMA5P28066 241 aa14.26□□□□□ -0.13
SHPRH-201ENST00000275233 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
SHPRH-201ENST00000275233 NUCB2P80303 420 aa14.26□□□□□ -0.13
SHPRH-201ENST00000275233 SART3Q15020 963 aaKnown RBP14.26□□□□□ -0.13
SHPRH-201ENST00000275233 FAM13BQ9NYF5 915 aa14.26□□□□□ -0.13
SHPRH-201ENST00000275233 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
SHPRH-201ENST00000275233 FMNL2Q96PY5 1086 aa14.26□□□□□ -0.13
SHPRH-201ENST00000275233 IGF1RP08069 1367 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 NBPF1Q3BBV0 1214 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
SHPRH-201ENST00000275233 CUX1P39880 1505 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
SHPRH-201ENST00000275233 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
SHPRH-201ENST00000275233 RUFY1Q96T51 708 aa14.24□□□□□ -0.13
SHPRH-201ENST00000275233 CCDC158Q5M9N0 1113 aa14.24□□□□□ -0.13
SHPRH-201ENST00000275233 HDGFL1Q5TGJ6 251 aa14.24□□□□□ -0.13
SHPRH-201ENST00000275233 SLC26A8Q96RN1 970 aa14.24□□□□□ -0.13
SHPRH-201ENST00000275233 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
SHPRH-201ENST00000275233 GNAI3P08754 354 aa14.23□□□□□ -0.13
SHPRH-201ENST00000275233 NEK4P51957 841 aa14.23□□□□□ -0.13
SHPRH-201ENST00000275233 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
SHPRH-201ENST00000275233 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
SHPRH-201ENST00000275233 RRS1Q15050 365 aaKnown RBP14.23□□□□□ -0.13
SHPRH-201ENST00000275233 SMC2O95347 1197 aa14.23□□□□□ -0.13
SHPRH-201ENST00000275233 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
SHPRH-201ENST00000275233 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
SHPRH-201ENST00000275233 GNAI2P04899 355 aa14.22□□□□□ -0.13
SHPRH-201ENST00000275233 ZHX3Q9H4I2 956 aa14.22□□□□□ -0.13
SHPRH-201ENST00000275233 BCAR3O75815 825 aa14.22□□□□□ -0.13
SHPRH-201ENST00000275233 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
SHPRH-201ENST00000275233 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
SHPRH-201ENST00000275233 PAF1Q8N7H5 531 aa14.21□□□□□ -0.13
SHPRH-201ENST00000275233 RRBP1Q9P2E9 1410 aaKnown RBP14.21□□□□□ -0.13
SHPRH-201ENST00000275233 IBSPP21815 317 aaPredicted RBP14.21□□□□□ -0.13
SHPRH-201ENST00000275233 FKBP4Q02790 459 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHPRH-201ENST00000275233 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
SHPRH-201ENST00000275233 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
SHPRH-201ENST00000275233 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.14
SHPRH-201ENST00000275233 NUP133Q8WUM0 1156 aa14.21□□□□□ -0.14
SHPRH-201ENST00000275233 NCOA2Q15596 1464 aa14.21□□□□□ -0.14
SHPRH-201ENST00000275233 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
SHPRH-201ENST00000275233 NAT10Q9H0A0 1025 aaKnown RBP14.2□□□□□ -0.14
SHPRH-201ENST00000275233 GNL3LQ9NVN8 582 aaKnown RBP14.2□□□□□ -0.14
SHPRH-201ENST00000275233 WWC2Q6AWC2 1192 aa14.19□□□□□ -0.14
SHPRH-201ENST00000275233 FIBPO43427 364 aa14.19□□□□□ -0.14
SHPRH-201ENST00000275233 MPHOSPH8Q99549 860 aa14.19□□□□□ -0.14
SHPRH-201ENST00000275233 PRPF40AO75400 957 aaKnown RBP14.19□□□□□ -0.14
SHPRH-201ENST00000275233 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
SHPRH-201ENST00000275233 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
SHPRH-201ENST00000275233 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
SHPRH-201ENST00000275233 AK7Q96M32 723 aa14.18□□□□□ -0.14
SHPRH-201ENST00000275233 TRIM5Q9C035 493 aa14.18□□□□□ -0.14
SHPRH-201ENST00000275233 MAGEC2Q9UBF1 373 aaPredicted RBP14.18□□□□□ -0.14
SHPRH-201ENST00000275233 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
SHPRH-201ENST00000275233 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
SHPRH-201ENST00000275233 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.17□□□□□ -0.145e-7■■■■□ 19.8
SHPRH-201ENST00000275233 CCDC57Q2TAC2 916 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 TEX35Q5T0J7 233 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 SPC24Q8NBT2 197 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 KINO60870 393 aaKnown RBP14.17□□□□□ -0.14
SHPRH-201ENST00000275233 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
SHPRH-201ENST00000275233 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 CCDC69A6NI79 296 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
SHPRH-201ENST00000275233 STK38Q15208 465 aa14.16□□□□□ -0.14
SHPRH-201ENST00000275233 NFKBIBQ15653 356 aa14.16□□□□□ -0.14
SHPRH-201ENST00000275233 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
SHPRH-201ENST00000275233 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
SHPRH-201ENST00000275233 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
SHPRH-201ENST00000275233 TXLNAP40222 546 aa14.16□□□□□ -0.14
SHPRH-201ENST00000275233 MPNDQ8N594 471 aa14.15□□□□□ -0.14
SHPRH-201ENST00000275233 LRRCC1Q9C099 1032 aa14.15□□□□□ -0.14
SHPRH-201ENST00000275233 HIP1O00291 1037 aa14.15□□□□□ -0.14
SHPRH-201ENST00000275233 AACSQ86V21 672 aa14.15□□□□□ -0.14
SHPRH-201ENST00000275233 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
SHPRH-201ENST00000275233 SYCP1Q15431 976 aa14.15□□□□□ -0.14
SHPRH-201ENST00000275233 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.15
SHPRH-201ENST00000275233 KIF21BO75037 1637 aa14.14□□□□□ -0.15
SHPRH-201ENST00000275233 CFTRP13569 1480 aa14.14□□□□□ -0.15
SHPRH-201ENST00000275233 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms