RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
HERC6-202ENST00000273960 EXOSC9Q06265 439 aaKnown RBP15.87■□□□□ 0.13
HERC6-202ENST00000273960 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
HERC6-202ENST00000273960 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
HERC6-202ENST00000273960 SMC5Q8IY18 1101 aa15.87■□□□□ 0.13
HERC6-202ENST00000273960 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
HERC6-202ENST00000273960 VGLL3A8MV65 326 aa15.86■□□□□ 0.13
HERC6-202ENST00000273960 TRIM27P14373 513 aa15.86■□□□□ 0.13
HERC6-202ENST00000273960 TMEM57Q8N5G2 664 aa15.86■□□□□ 0.13
HERC6-202ENST00000273960 DUOX2Q9NRD8 1548 aa15.86■□□□□ 0.13
HERC6-202ENST00000273960 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
HERC6-202ENST00000273960 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
HERC6-202ENST00000273960 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
HERC6-202ENST00000273960 ARHGEF5Q12774 1597 aa15.85■□□□□ 0.13
HERC6-202ENST00000273960 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
HERC6-202ENST00000273960 KLHL40Q2TBA0 621 aa15.84■□□□□ 0.13
HERC6-202ENST00000273960 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
HERC6-202ENST00000273960 MYO5CQ9NQX4 1742 aa15.84■□□□□ 0.13
HERC6-202ENST00000273960 AK9Q5TCS8 1911 aa15.84■□□□□ 0.13
HERC6-202ENST00000273960 NOL7Q9UMY1 257 aaKnown RBP15.84■□□□□ 0.13
HERC6-202ENST00000273960 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
HERC6-202ENST00000273960 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
HERC6-202ENST00000273960 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
HERC6-202ENST00000273960 SMAP1Q8IYB5 467 aaPredicted RBP15.83■□□□□ 0.12
HERC6-202ENST00000273960 ZGPATQ8N5A5 531 aaKnown RBP15.83■□□□□ 0.12
HERC6-202ENST00000273960 ZKSCAN5Q9Y2L8 839 aa15.83■□□□□ 0.12
HERC6-202ENST00000273960 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
HERC6-202ENST00000273960 PDE4CQ08493 712 aa15.82■□□□□ 0.12
HERC6-202ENST00000273960 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
HERC6-202ENST00000273960 FBXO31Q5XUX0 539 aaPredicted RBP15.82■□□□□ 0.12
HERC6-202ENST00000273960 INSRP06213 1382 aa15.82■□□□□ 0.12
HERC6-202ENST00000273960 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
HERC6-202ENST00000273960 ZBTB22O15209 634 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 DDIT3P35638 169 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 MTHFSP49914 203 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
HERC6-202ENST00000273960 KIF2CQ99661 725 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
HERC6-202ENST00000273960 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 GDPD2Q9HCC8 539 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 CABP2Q9NPB3 220 aa15.81■□□□□ 0.12
HERC6-202ENST00000273960 E9PCH4 1651 aa15.8■□□□□ 0.12
HERC6-202ENST00000273960 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
HERC6-202ENST00000273960 UGGT1Q9NYU2 1555 aa15.8■□□□□ 0.12
HERC6-202ENST00000273960 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
HERC6-202ENST00000273960 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
HERC6-202ENST00000273960 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
HERC6-202ENST00000273960 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
HERC6-202ENST00000273960 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
HERC6-202ENST00000273960 RBM25P49756 843 aaKnown RBP15.78■□□□□ 0.12
HERC6-202ENST00000273960 GPT2Q8TD30 523 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 SNX21Q969T3 373 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 CCDC94Q9BW85 323 aaPredicted RBP15.78■□□□□ 0.12
HERC6-202ENST00000273960 DTNBO60941 627 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 LMBRD1Q9NUN5 540 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
HERC6-202ENST00000273960 ZSCAN20P17040 1043 aaPredicted RBP15.77■□□□□ 0.12
HERC6-202ENST00000273960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
HERC6-202ENST00000273960 IDI1Q13907 227 aa15.77■□□□□ 0.12
HERC6-202ENST00000273960 CSPP1Q1MSJ5 1256 aa15.77■□□□□ 0.11
HERC6-202ENST00000273960 CGNQ9P2M7 1197 aaKnown RBP15.76■□□□□ 0.11
HERC6-202ENST00000273960 NOS1P29475 1434 aa15.76■□□□□ 0.11
HERC6-202ENST00000273960 ZNF500O60304 480 aaPredicted RBP15.76■□□□□ 0.11
HERC6-202ENST00000273960 ATF7IPQ6VMQ6 1270 aa15.76■□□□□ 0.11
HERC6-202ENST00000273960 ABCC1P33527 1531 aa15.76■□□□□ 0.11
HERC6-202ENST00000273960 DMTNQ08495 405 aa15.76■□□□□ 0.11
HERC6-202ENST00000273960 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
HERC6-202ENST00000273960 KIF16BQ96L93 1317 aa15.75■□□□□ 0.11
HERC6-202ENST00000273960 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
HERC6-202ENST00000273960 PTMSP20962 102 aa15.74■□□□□ 0.11
HERC6-202ENST00000273960 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
HERC6-202ENST00000273960 SOX12O15370 315 aa15.74■□□□□ 0.11
HERC6-202ENST00000273960 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
HERC6-202ENST00000273960 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
HERC6-202ENST00000273960 ZNF771Q7L3S4 317 aaPredicted RBP15.73■□□□□ 0.11
HERC6-202ENST00000273960 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
HERC6-202ENST00000273960 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
HERC6-202ENST00000273960 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.11
HERC6-202ENST00000273960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
HERC6-202ENST00000273960 C16orf71Q8IYS4 520 aaPredicted RBP15.73■□□□□ 0.11
HERC6-202ENST00000273960 NINLQ9Y2I6 1382 aa15.73■□□□□ 0.11
HERC6-202ENST00000273960 NUCB1Q02818 461 aa15.73■□□□□ 0.11
HERC6-202ENST00000273960 ZNF445P59923 1031 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 ATP10AO60312 1499 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 MAST1Q9Y2H9 1570 aa15.72■□□□□ 0.11
HERC6-202ENST00000273960 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
HERC6-202ENST00000273960 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.11
HERC6-202ENST00000273960 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
HERC6-202ENST00000273960 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.11
HERC6-202ENST00000273960 MTERF4Q7Z6M4 381 aaKnown RBP15.71■□□□□ 0.11
HERC6-202ENST00000273960 GPRASP1Q5JY77 1395 aa15.7■□□□□ 0.1
HERC6-202ENST00000273960 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
HERC6-202ENST00000273960 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
HERC6-202ENST00000273960 ATAD2Q6PL18 1390 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms