RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 SMC4Q9NTJ3 1288 aa12.33□□□□□ -0.44
RUBCN-201ENST00000273582 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
RUBCN-201ENST00000273582 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
RUBCN-201ENST00000273582 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
RUBCN-201ENST00000273582 PCDHB15Q9Y5E8 787 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
RUBCN-201ENST00000273582 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
RUBCN-201ENST00000273582 PTMAP06454 111 aaKnown RBP12.31□□□□□ -0.44
RUBCN-201ENST00000273582 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
RUBCN-201ENST00000273582 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
RUBCN-201ENST00000273582 ATP7BP35670 1465 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
RUBCN-201ENST00000273582 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 CLEC17AQ6ZS10 378 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
RUBCN-201ENST00000273582 PDIA4P13667 645 aaKnown RBP12.3□□□□□ -0.44
RUBCN-201ENST00000273582 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
RUBCN-201ENST00000273582 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
RUBCN-201ENST00000273582 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
RUBCN-201ENST00000273582 IQSEC2Q5JU85 1478 aa12.3□□□□□ -0.44
RUBCN-201ENST00000273582 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
RUBCN-201ENST00000273582 TRIM27P14373 513 aa12.29□□□□□ -0.44
RUBCN-201ENST00000273582 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
RUBCN-201ENST00000273582 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
RUBCN-201ENST00000273582 EXOSC9Q06265 439 aaKnown RBP12.29□□□□□ -0.44
RUBCN-201ENST00000273582 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
RUBCN-201ENST00000273582 ERCC6L2Q5T890 1561 aa12.29□□□□□ -0.44
RUBCN-201ENST00000273582 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
RUBCN-201ENST00000273582 HMMRO75330 724 aa12.28□□□□□ -0.44
RUBCN-201ENST00000273582 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
RUBCN-201ENST00000273582 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
RUBCN-201ENST00000273582 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
RUBCN-201ENST00000273582 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.44
RUBCN-201ENST00000273582 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.44
RUBCN-201ENST00000273582 MCM4P33991 863 aa12.27□□□□□ -0.44
RUBCN-201ENST00000273582 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 GBP4Q96PP9 640 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 REREQ9P2R6 1566 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 MRE11P49959 708 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 PLEKHF1Q96S99 279 aa12.27□□□□□ -0.45
RUBCN-201ENST00000273582 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 RIPK4P57078 832 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 TTC21BQ7Z4L5 1316 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 IGHDP01880 384 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 RABEP1Q15276 862 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 RIMS2Q9UQ26 1411 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 RLBP1P12271 317 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
RUBCN-201ENST00000273582 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 USP32Q8NFA0 1604 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 MCM2P49736 904 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 ABCC4O15439 1325 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 VAMP4O75379 141 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 CLSTN1O94985 981 aa12.25□□□□□ -0.45
RUBCN-201ENST00000273582 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
RUBCN-201ENST00000273582 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
RUBCN-201ENST00000273582 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 DCTPP1Q9H773 170 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
RUBCN-201ENST00000273582 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 REC8O95072 547 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
RUBCN-201ENST00000273582 RAPGEF3O95398 923 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
RUBCN-201ENST00000273582 SPHKAPQ2M3C7 1700 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 NUCB2P80303 420 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 ESF1Q9H501 851 aaKnown RBP12.23□□□□□ -0.45
RUBCN-201ENST00000273582 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 FRAT2O75474 233 aaPredicted RBP12.23□□□□□ -0.45
RUBCN-201ENST00000273582 HOXB7P09629 217 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
RUBCN-201ENST00000273582 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 CDC42BPGQ6DT37 1551 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 NCOA3Q9Y6Q9 1424 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
RUBCN-201ENST00000273582 CHL1O00533 1208 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 COG3Q96JB2 828 aa12.22□□□□□ -0.45
RUBCN-201ENST00000273582 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.45
RUBCN-201ENST00000273582 USP31Q70CQ4 1352 aa12.21□□□□□ -0.45
RUBCN-201ENST00000273582 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
RUBCN-201ENST00000273582 FSD2A1L4K1 749 aa12.21□□□□□ -0.45
RUBCN-201ENST00000273582 CDC45O75419 566 aa12.21□□□□□ -0.45
RUBCN-201ENST00000273582 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.46
RUBCN-201ENST00000273582 NUCB1Q02818 461 aa12.21□□□□□ -0.46
RUBCN-201ENST00000273582 CFAP74Q9C0B2 1584 aa12.21□□□□□ -0.46
RUBCN-201ENST00000273582 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms