RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ZNHIT6Q9NWK9 470 aaKnown RBP15.75■□□□□ 0.11
PRDM16-201ENST00000270722 RABEP1Q15276 862 aa15.74■□□□□ 0.11
PRDM16-201ENST00000270722 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
PRDM16-201ENST00000270722 EIF2S2P20042 333 aaKnown RBP15.74■□□□□ 0.11
PRDM16-201ENST00000270722 ERC1Q8IUD2 1116 aa15.74■□□□□ 0.11
PRDM16-201ENST00000270722 NACAP1Q9BZK3 213 aa15.74■□□□□ 0.11
PRDM16-201ENST00000270722 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
PRDM16-201ENST00000270722 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
PRDM16-201ENST00000270722 SEPT7Q16181 437 aaKnown RBP15.73■□□□□ 0.11
PRDM16-201ENST00000270722 KRT18P05783 430 aaKnown RBP15.73■□□□□ 0.11
PRDM16-201ENST00000270722 ZMYND15Q9H091 742 aa15.73■□□□□ 0.11
PRDM16-201ENST00000270722 SARNPP82979 210 aaKnown RBP15.72■□□□□ 0.11
PRDM16-201ENST00000270722 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
PRDM16-201ENST00000270722 ZNF592Q92610 1267 aa15.72■□□□□ 0.11
PRDM16-201ENST00000270722 LETM1O95202 739 aaPredicted RBP15.72■□□□□ 0.11
PRDM16-201ENST00000270722 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
PRDM16-201ENST00000270722 NUTM2FA1L443 756 aa15.72■□□□□ 0.11
PRDM16-201ENST00000270722 MCM2P49736 904 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 WASHC4Q2M389 1173 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 TCHPQ9BT92 498 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 POTEJP0CG39 1038 aa15.71■□□□□ 0.11
PRDM16-201ENST00000270722 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
PRDM16-201ENST00000270722 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
PRDM16-201ENST00000270722 SEPT11Q9NVA2 429 aaKnown RBP15.7■□□□□ 0.1
PRDM16-201ENST00000270722 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
PRDM16-201ENST00000270722 SDF4Q9BRK5 362 aa15.7■□□□□ 0.1
PRDM16-201ENST00000270722 CETN2P41208 172 aa15.7■□□□□ 0.1
PRDM16-201ENST00000270722 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
PRDM16-201ENST00000270722 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
PRDM16-201ENST00000270722 NEBLO76041 1014 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 MRE11P49959 708 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 TRIM22Q8IYM9 498 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 TIGD1Q96MW7 591 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 ZSCAN25Q6NSZ9 544 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 MIPOL1Q8TD10 442 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 GNAI3P08754 354 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
PRDM16-201ENST00000270722 LUZP1Q86V48 1076 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 KINO60870 393 aaKnown RBP15.69■□□□□ 0.1
PRDM16-201ENST00000270722 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 IQCEQ6IPM2 695 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 DACH1Q9UI36 760 aa15.69■□□□□ 0.1
PRDM16-201ENST00000270722 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
PRDM16-201ENST00000270722 CCDC91Q7Z6B0 441 aa15.68■□□□□ 0.1
PRDM16-201ENST00000270722 JPH4Q96JJ6 628 aa15.67■□□□□ 0.1
PRDM16-201ENST00000270722 NEUROD6Q96NK8 337 aa15.67■□□□□ 0.1
PRDM16-201ENST00000270722 PTPRGP23470 1445 aa15.67■□□□□ 0.1
PRDM16-201ENST00000270722 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
PRDM16-201ENST00000270722 UBTFL1P0CB47 393 aaPredicted RBP15.67■□□□□ 0.1
PRDM16-201ENST00000270722 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
PRDM16-201ENST00000270722 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
PRDM16-201ENST00000270722 TSPYL4Q9UJ04 414 aa15.66■□□□□ 0.1
PRDM16-201ENST00000270722 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
PRDM16-201ENST00000270722 TNIP1Q15025 636 aa15.66■□□□□ 0.1
PRDM16-201ENST00000270722 TMEM87AQ8NBN3 555 aa15.66■□□□□ 0.1
PRDM16-201ENST00000270722 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRDM16-201ENST00000270722 CCDC97Q96F63 343 aaPredicted RBP15.66■□□□□ 0.1
PRDM16-201ENST00000270722 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
PRDM16-201ENST00000270722 FAM193AP78312 1265 aa15.65■□□□□ 0.1
PRDM16-201ENST00000270722 RNF168Q8IYW5 571 aaPredicted RBP15.65■□□□□ 0.1
PRDM16-201ENST00000270722 GOLGA6L9A6NEM1 432 aa15.65■□□□□ 0.1
PRDM16-201ENST00000270722 NF2P35240 595 aa15.65■□□□□ 0.1
PRDM16-201ENST00000270722 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
PRDM16-201ENST00000270722 CDKL5O76039 1030 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 ANKRD1Q15327 319 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC158Q5M9N0 1113 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 SMC2O95347 1197 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
PRDM16-201ENST00000270722 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
PRDM16-201ENST00000270722 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
PRDM16-201ENST00000270722 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC175P0C221 793 aa15.63■□□□□ 0.09
PRDM16-201ENST00000270722 MICALCLQ6ZW33 695 aa15.63■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC7Q96M83 1385 aa15.63■□□□□ 0.09
PRDM16-201ENST00000270722 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
PRDM16-201ENST00000270722 ERLIN1O75477 346 aa15.62■□□□□ 0.09
PRDM16-201ENST00000270722 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
PRDM16-201ENST00000270722 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
PRDM16-201ENST00000270722 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
PRDM16-201ENST00000270722 MINK1Q8N4C8 1332 aaPredicted RBP15.62■□□□□ 0.09
PRDM16-201ENST00000270722 NASPP49321 788 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-201ENST00000270722 MBD3O95983 291 aa15.61■□□□□ 0.09
PRDM16-201ENST00000270722 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
PRDM16-201ENST00000270722 RIPK4P57078 832 aa15.61■□□□□ 0.09
PRDM16-201ENST00000270722 PPP1R1BQ9UD71 204 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-201ENST00000270722 SH3BGRP55822 239 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-201ENST00000270722 CCDC57Q2TAC2 916 aa15.61■□□□□ 0.09
PRDM16-201ENST00000270722 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
PRDM16-201ENST00000270722 ZNF710Q8N1W2 664 aa15.6■□□□□ 0.09
PRDM16-201ENST00000270722 NOL7Q9UMY1 257 aaKnown RBP15.6■□□□□ 0.09
PRDM16-201ENST00000270722 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms