RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
CDH13-201ENST00000268613 FAM135AQ9P2D6 1515 aa9.62□□□□□ -0.87
CDH13-201ENST00000268613 DENND4BO75064 1496 aaPredicted RBP9.62□□□□□ -0.87
CDH13-201ENST00000268613 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
CDH13-201ENST00000268613 POGZQ7Z3K3 1410 aa9.62□□□□□ -0.87
CDH13-201ENST00000268613 GPATCH8Q9UKJ3 1502 aaKnown RBP9.62□□□□□ -0.87
CDH13-201ENST00000268613 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
CDH13-201ENST00000268613 SH3BP5O60239 455 aa9.62□□□□□ -0.87
CDH13-201ENST00000268613 MIA2Q96PC5 1412 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 RAI14Q9P0K7 980 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 SAMD9LQ8IVG5 1584 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 HECW2Q9P2P5 1572 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 SSR1P43307 286 aaKnown RBP9.61□□□□□ -0.87
CDH13-201ENST00000268613 SETDB1Q15047 1291 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 TAF3Q5VWG9 929 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 PMM1Q92871 262 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 GPATCH3Q96I76 525 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 PPP1R1BQ9UD71 204 aaPredicted RBP9.61□□□□□ -0.87
CDH13-201ENST00000268613 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
CDH13-201ENST00000268613 INO80Q9ULG1 1556 aaPredicted RBP9.6□□□□□ -0.87
CDH13-201ENST00000268613 MLH3Q9UHC1 1453 aa9.6□□□□□ -0.87
CDH13-201ENST00000268613 SATB1Q01826 763 aa9.6□□□□□ -0.87
CDH13-201ENST00000268613 ARHGAP5Q13017 1502 aa9.6□□□□□ -0.87
CDH13-201ENST00000268613 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
CDH13-201ENST00000268613 ADGBQ8N7X0 1667 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 MKL1Q969V6 931 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
CDH13-201ENST00000268613 AGLP35573 1532 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
CDH13-201ENST00000268613 TDO2P48775 406 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 APLP1P51693 650 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 ZKSCAN8Q15776 578 aaPredicted RBP9.59□□□□□ -0.87
CDH13-201ENST00000268613 MORC4Q8TE76 937 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
CDH13-201ENST00000268613 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 ZFYVE16Q7Z3T8 1539 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 MRVI1Q9Y6F6 885 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
CDH13-201ENST00000268613 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 COL17A1Q9UMD9 1497 aaPredicted RBP9.58□□□□□ -0.88
CDH13-201ENST00000268613 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
CDH13-201ENST00000268613 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
CDH13-201ENST00000268613 TMX4Q9H1E5 349 aaPredicted RBP9.58□□□□□ -0.88
CDH13-201ENST00000268613 MTUS2Q5JR59 1369 aa9.58□□□□□ -0.88
CDH13-201ENST00000268613 CHGAP10645 457 aaKnown RBP9.57□□□□□ -0.88
CDH13-201ENST00000268613 LMOD3Q0VAK6 560 aa9.57□□□□□ -0.88
CDH13-201ENST00000268613 HS6ST3Q8IZP7 471 aa9.57□□□□□ -0.88
CDH13-201ENST00000268613 ARHGEF10LQ9HCE6 1279 aa9.57□□□□□ -0.88
CDH13-201ENST00000268613 CTDP1Q9Y5B0 961 aaPredicted RBP9.57□□□□□ -0.88
CDH13-201ENST00000268613 RTEL1-TNFRSF6BF6WH68 1400 aa9.57□□□□□ -0.88
CDH13-201ENST00000268613 CALRP27797 417 aaKnown RBP9.57□□□□□ -0.88
CDH13-201ENST00000268613 MCCD1P59942 119 aaPredicted RBP9.57□□□□□ -0.88
CDH13-201ENST00000268613 GABBR1Q9UBS5 961 aa9.57□□□□□ -0.88
CDH13-201ENST00000268613 ZNF777Q9ULD5 760 aaPredicted RBP9.57□□□□□ -0.88
CDH13-201ENST00000268613 EXOC5O00471 708 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 CACTIN-AS1Q8N1I8 211 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 MAF1Q9H063 256 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 SHANK2Q9UPX8 1470 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 ADAMTSL3P82987 1691 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 TRAK2O60296 914 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 ZBTB9Q96C00 473 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 UBA5Q9GZZ9 404 aa9.56□□□□□ -0.88
CDH13-201ENST00000268613 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
CDH13-201ENST00000268613 BDNFP23560 247 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 DMTNQ08495 405 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 PUS10Q3MIT2 529 aaKnown RBP9.55□□□□□ -0.88
CDH13-201ENST00000268613 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
CDH13-201ENST00000268613 CALR3Q96L12 384 aaKnown RBP9.55□□□□□ -0.88
CDH13-201ENST00000268613 BSDC1Q9NW68 430 aaPredicted RBP9.55□□□□□ -0.88
CDH13-201ENST00000268613 AMOTL2Q9Y2J4 779 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 CCNB3Q8WWL7 1395 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 EIF2AK4Q9P2K8 1649 aaKnown RBP9.55□□□□□ -0.88
CDH13-201ENST00000268613 KIDINS220Q9ULH0 1771 aa9.55□□□□□ -0.88
CDH13-201ENST00000268613 KCNA1Q09470 495 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
CDH13-201ENST00000268613 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 MYOM3Q5VTT5 1437 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDH13-201ENST00000268613 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 C1QTNF12Q5T7M4 302 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 DMRT2Q9Y5R5 561 aa9.54□□□□□ -0.88
CDH13-201ENST00000268613 STK10O94804 968 aaKnown RBP9.53□□□□□ -0.88
CDH13-201ENST00000268613 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
CDH13-201ENST00000268613 WDR78Q5VTH9 848 aa9.53□□□□□ -0.88
CDH13-201ENST00000268613 METTL14Q9HCE5 456 aaKnown RBP9.53□□□□□ -0.88
CDH13-201ENST00000268613 C9orf84Q5VXU9 1444 aa9.53□□□□□ -0.88
CDH13-201ENST00000268613 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
CDH13-201ENST00000268613 TTC30BQ8N4P2 665 aa9.53□□□□□ -0.88
CDH13-201ENST00000268613 FEZ2Q9UHY8 353 aaPredicted RBP9.53□□□□□ -0.88
CDH13-201ENST00000268613 ATP10AO60312 1499 aa9.52□□□□□ -0.88
CDH13-201ENST00000268613 MBD5Q9P267 1494 aa9.52□□□□□ -0.88
CDH13-201ENST00000268613 SCAPERQ9BY12 1400 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms