RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 KCNA6P17658 529 aa22.09■■□□□ 1.13
CHKA-201ENST00000265689 HSPA2P54652 639 aa22.09■■□□□ 1.13
CHKA-201ENST00000265689 ATP7BP35670 1465 aa22.08■■□□□ 1.13
CHKA-201ENST00000265689 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
CHKA-201ENST00000265689 FBLN1P23142 703 aa22.08■■□□□ 1.12
CHKA-201ENST00000265689 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
CHKA-201ENST00000265689 PPIP5K1Q6PFW1 1433 aa22.07■■□□□ 1.12
CHKA-201ENST00000265689 NUDT16Q96DE0 195 aaKnown RBP22.06■■□□□ 1.12
CHKA-201ENST00000265689 U2SURPO15042 1029 aaKnown RBP22.06■■□□□ 1.12
CHKA-201ENST00000265689 COL3A1P02461 1466 aaPredicted RBP22.06■■□□□ 1.12
CHKA-201ENST00000265689 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
CHKA-201ENST00000265689 CPS1P31327 1500 aa22.05■■□□□ 1.12
CHKA-201ENST00000265689 ANKLE2Q86XL3 938 aa22.05■■□□□ 1.12
CHKA-201ENST00000265689 KIF20BQ96Q89 1820 aa22.05■■□□□ 1.12
CHKA-201ENST00000265689 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
CHKA-201ENST00000265689 KDM4FA0A1W2PPD8 638 aa22.04■■□□□ 1.12
CHKA-201ENST00000265689 ZNF142P52746 1687 aaPredicted RBP22.04■■□□□ 1.12
CHKA-201ENST00000265689 CPSF1Q10570 1443 aaKnown RBP22.03■■□□□ 1.12
CHKA-201ENST00000265689 BCAR3O75815 825 aa22.03■■□□□ 1.12
CHKA-201ENST00000265689 ANP32EQ9BTT0 268 aa22.03■■□□□ 1.12
CHKA-201ENST00000265689 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
CHKA-201ENST00000265689 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.02■■□□□ 1.11
CHKA-201ENST00000265689 ZRANB1Q9UGI0 708 aa22.01■■□□□ 1.11
CHKA-201ENST00000265689 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
CHKA-201ENST00000265689 CCDC27Q2M243 656 aa22■■□□□ 1.11
CHKA-201ENST00000265689 NME9Q86XW9 330 aa22■■□□□ 1.11
CHKA-201ENST00000265689 WDR63Q8IWG1 891 aa22■■□□□ 1.11
CHKA-201ENST00000265689 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
CHKA-201ENST00000265689 RGPD8O14715 1765 aaPredicted RBP21.99■■□□□ 1.11
CHKA-201ENST00000265689 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
CHKA-201ENST00000265689 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
CHKA-201ENST00000265689 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
CHKA-201ENST00000265689 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
CHKA-201ENST00000265689 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
CHKA-201ENST00000265689 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
CHKA-201ENST00000265689 ADGRB2O60241 1585 aa21.97■■□□□ 1.11
CHKA-201ENST00000265689 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
CHKA-201ENST00000265689 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
CHKA-201ENST00000265689 TMPOP42166 694 aaKnown RBP21.94■■□□□ 1.1
CHKA-201ENST00000265689 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
CHKA-201ENST00000265689 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
CHKA-201ENST00000265689 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
CHKA-201ENST00000265689 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
CHKA-201ENST00000265689 TRIM35Q9UPQ4 493 aa21.9■■□□□ 1.1
CHKA-201ENST00000265689 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
CHKA-201ENST00000265689 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
CHKA-201ENST00000265689 COG3Q96JB2 828 aa21.9■■□□□ 1.1
CHKA-201ENST00000265689 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
CHKA-201ENST00000265689 FANCIQ9NVI1 1328 aa21.9■■□□□ 1.1
CHKA-201ENST00000265689 MAP2P11137 1827 aaKnown RBP21.89■■□□□ 1.1
CHKA-201ENST00000265689 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.09
CHKA-201ENST00000265689 AKAP12Q02952 1782 aa21.89■■□□□ 1.09
CHKA-201ENST00000265689 RARSP54136 660 aaKnown RBP21.88■■□□□ 1.09
CHKA-201ENST00000265689 ITSN1Q15811 1721 aa21.87■■□□□ 1.09
CHKA-201ENST00000265689 SOX12O15370 315 aa21.87■■□□□ 1.09
CHKA-201ENST00000265689 ACEP12821 1306 aa21.87■■□□□ 1.09
CHKA-201ENST00000265689 FCHSD2O94868 740 aa21.87■■□□□ 1.09
CHKA-201ENST00000265689 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
CHKA-201ENST00000265689 RIPK4P57078 832 aa21.86■■□□□ 1.09
CHKA-201ENST00000265689 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
CHKA-201ENST00000265689 SKAP1Q86WV1 359 aa21.86■■□□□ 1.09
CHKA-201ENST00000265689 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
CHKA-201ENST00000265689 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
CHKA-201ENST00000265689 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
CHKA-201ENST00000265689 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
CHKA-201ENST00000265689 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
CHKA-201ENST00000265689 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
CHKA-201ENST00000265689 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
CHKA-201ENST00000265689 AATKQ6ZMQ8 1374 aa21.85■■□□□ 1.09
CHKA-201ENST00000265689 KDM2BQ8NHM5 1336 aa21.85■■□□□ 1.09
CHKA-201ENST00000265689 PRKAR2BP31323 418 aa21.85■■□□□ 1.09
CHKA-201ENST00000265689 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
CHKA-201ENST00000265689 HMOX1P09601 288 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 PLEKHG5O94827 1062 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 LRRC7Q96NW7 1537 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
CHKA-201ENST00000265689 IL13P35225 146 aa21.83■■□□□ 1.09
CHKA-201ENST00000265689 MSH5O43196 834 aa21.83■■□□□ 1.09
CHKA-201ENST00000265689 TOPAZ1Q8N9V7 1692 aa21.82■■□□□ 1.08
CHKA-201ENST00000265689 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
CHKA-201ENST00000265689 NUTM2GQ5VZR2 741 aa21.82■■□□□ 1.08
CHKA-201ENST00000265689 CENPQQ7L2Z9 268 aaPredicted RBP21.8■■□□□ 1.08
CHKA-201ENST00000265689 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
CHKA-201ENST00000265689 COG6Q9Y2V7 657 aa21.8■■□□□ 1.08
CHKA-201ENST00000265689 USP6P35125 1406 aa21.79■■□□□ 1.08
CHKA-201ENST00000265689 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
CHKA-201ENST00000265689 TNNQ9UQP3 1299 aa21.79■■□□□ 1.08
CHKA-201ENST00000265689 NRKQ7Z2Y5 1582 aa21.78■■□□□ 1.08
CHKA-201ENST00000265689 IL16Q14005 1332 aa21.78■■□□□ 1.08
CHKA-201ENST00000265689 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
CHKA-201ENST00000265689 XPCQ01831 940 aaPredicted RBP21.78■■□□□ 1.08
CHKA-201ENST00000265689 NEFMP07197 916 aa21.77■■□□□ 1.08
CHKA-201ENST00000265689 NGDNQ8NEJ9 315 aaKnown RBP21.77■■□□□ 1.08
CHKA-201ENST00000265689 RLBP1P12271 317 aa21.76■■□□□ 1.07
CHKA-201ENST00000265689 LMTK3Q96Q04 1460 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms