RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 WWC2Q6AWC2 1192 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 MCTP1Q6DN14 999 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 LEKR1Q6ZMV7 388 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 ANO2Q9NQ90 1003 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 RPRD2Q5VT52 1461 aaKnown RBP8.12□□□□□ -1.11
SLF1-201ENST00000265140 C20orf194Q5TEA3 1177 aa8.12□□□□□ -1.11
SLF1-201ENST00000265140 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
SLF1-201ENST00000265140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.12□□□□□ -1.11
SLF1-201ENST00000265140 ENOX2Q16206 610 aaKnown RBP8.12□□□□□ -1.11
SLF1-201ENST00000265140 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
SLF1-201ENST00000265140 OFD1O75665 1012 aa8.12□□□□□ -1.11
SLF1-201ENST00000265140 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 TRAK2O60296 914 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 CT47B1P0C2W7 299 aaPredicted RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 TRHP20396 242 aaPredicted RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 SKAP1Q86WV1 359 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 MRE11P49959 708 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 CPLX2Q6PUV4 134 aaKnown RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 KIAA0754O94854 1291 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
SLF1-201ENST00000265140 SLC52A1Q9NWF4 448 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 PTPRKQ15262 1439 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 ERBINQ96RT1 1412 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 ERLIN2O94905 339 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 SCAPERQ9BY12 1400 aa8.11□□□□□ -1.11
SLF1-201ENST00000265140 NF2P35240 595 aa8.1□□□□□ -1.11
SLF1-201ENST00000265140 CDK13Q14004 1512 aaKnown RBP8.1□□□□□ -1.11
SLF1-201ENST00000265140 GIMAP7Q8NHV1 300 aa8.1□□□□□ -1.11
SLF1-201ENST00000265140 TAF3Q5VWG9 929 aa8.1□□□□□ -1.11
SLF1-201ENST00000265140 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
SLF1-201ENST00000265140 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
SLF1-201ENST00000265140 MVPQ14764 893 aaKnown RBP8.1□□□□□ -1.11
SLF1-201ENST00000265140 CTTNBP2Q8WZ74 1663 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 CDC45O75419 566 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 AXDND1Q5T1B0 1012 aaPredicted RBP8.09□□□□□ -1.11
SLF1-201ENST00000265140 DUSP27Q5VZP5 1158 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 PRAM1Q96QH2 718 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 DIAPH3Q9NSV4 1193 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 C9orf78Q9NZ63 289 aaPredicted RBP8.09□□□□□ -1.11
SLF1-201ENST00000265140 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
SLF1-201ENST00000265140 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 GOLGA6L10A6NI86 522 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 IFT57Q9NWB7 429 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 TSPYL4Q9UJ04 414 aa8.09□□□□□ -1.11
SLF1-201ENST00000265140 MRC2Q9UBG0 1479 aa8.09□□□□□ -1.12
SLF1-201ENST00000265140 PCF11O94913 1555 aaKnown RBP8.08□□□□□ -1.12
SLF1-201ENST00000265140 TMEM132AQ24JP5 1023 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 FAM43AQ8N2R8 423 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 CFAP43Q8NDM7 1665 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 IFT140Q96RY7 1462 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 MAPKBP1O60336 1514 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 ARHGAP5Q13017 1502 aa8.08□□□□□ -1.12
SLF1-201ENST00000265140 NOB1Q9ULX3 412 aaKnown RBP8.08□□□□□ -1.12
SLF1-201ENST00000265140 USP8P40818 1118 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 RARSP54136 660 aaKnown RBP8.07□□□□□ -1.12
SLF1-201ENST00000265140 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
SLF1-201ENST00000265140 MCM4P33991 863 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 SYCP1Q15431 976 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 DHX37Q8IY37 1157 aaKnown RBP8.07□□□□□ -1.12
SLF1-201ENST00000265140 PLEKHH2Q8IVE3 1493 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 GNAI3P08754 354 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 NEK4P51957 841 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 TMPOP42166 694 aaKnown RBP8.07□□□□□ -1.12
SLF1-201ENST00000265140 SASS6Q6UVJ0 657 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 URB2Q14146 1524 aaKnown RBP8.07□□□□□ -1.12
SLF1-201ENST00000265140 NLRP6P59044 892 aa8.07□□□□□ -1.12
SLF1-201ENST00000265140 NINLQ9Y2I6 1382 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.06□□□□□ -1.12
SLF1-201ENST00000265140 SPATA24Q86W54 205 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 FCHSD2O94868 740 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 GBP2P32456 591 aaPredicted RBP8.06□□□□□ -1.12
SLF1-201ENST00000265140 MTERF4Q7Z6M4 381 aaKnown RBP8.06□□□□□ -1.12
SLF1-201ENST00000265140 PPM1EQ8WY54 764 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 CEP63Q96MT8 703 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 CPLX1O14810 134 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 RABEP1Q15276 862 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 PDILTQ8N807 584 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
SLF1-201ENST00000265140 HSP90AB4PQ58FF6 505 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 SSH1Q8WYL5 1049 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 C1orf115Q9H7X2 142 aa8.06□□□□□ -1.12
SLF1-201ENST00000265140 SULT6B1Q6IMI4 303 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 OLFM4Q6UX06 510 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 FAM69CQ0P6D2 419 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 FBXW7Q969H0 707 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 RAPGEF3O95398 923 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 STAMBPO95630 424 aa8.05□□□□□ -1.12
SLF1-201ENST00000265140 IFIT2P09913 472 aaKnown RBP8.05□□□□□ -1.12
SLF1-201ENST00000265140 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms