RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 BBXQ8WY36 941 aaPredicted RBP6.46□□□□□ -1.38
XRN1-201ENST00000264951 C9orf78Q9NZ63 289 aaPredicted RBP6.46□□□□□ -1.38
XRN1-201ENST00000264951 TAF4BQ92750 862 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 CARMIL2Q6F5E8 1435 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 DNAAF4Q8WXU2 420 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 DNAJC2Q99543 621 aaKnown RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 CCDC175P0C221 793 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 KIF18AQ8NI77 898 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 CEP63Q96MT8 703 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 HMGB3O15347 200 aaKnown RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 KRT85P78386 507 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 CDK5RAP3Q96JB5 506 aa6.45□□□□□ -1.38
XRN1-201ENST00000264951 NAA15Q9BXJ9 866 aaKnown RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 MAP2K1Q02750 393 aaPredicted RBP6.45□□□□□ -1.38
XRN1-201ENST00000264951 PPP1R12BO60237 982 aaPredicted RBP6.44□□□□□ -1.38
XRN1-201ENST00000264951 PLPPR3Q6T4P5 718 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 ZNF397Q8NF99 534 aaPredicted RBP6.44□□□□□ -1.38
XRN1-201ENST00000264951 KCNH8Q96L42 1107 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 BMP2KQ9NSY1 1161 aaPredicted RBP6.44□□□□□ -1.38
XRN1-201ENST00000264951 A6NNZ2 444 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 GNAI1P63096 354 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 TUBB8Q3ZCM7 444 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 EHBP1Q8NDI1 1231 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 SIN3AQ96ST3 1273 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 ARHGAP29Q52LW3 1261 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 SWAP70Q9UH65 585 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 PLEKHH1Q9ULM0 1364 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 WASHC2CQ9Y4E1 1318 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 CNTLNQ9NXG0 1405 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 CNTROBQ8N137 903 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 TRIM22Q8IYM9 498 aa6.44□□□□□ -1.38
XRN1-201ENST00000264951 GNAI3P08754 354 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 PKD2Q13563 968 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 ZSCAN31Q96LW9 406 aaPredicted RBP6.43□□□□□ -1.38
XRN1-201ENST00000264951 SERPINC1P01008 464 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 TEFQ10587 303 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
XRN1-201ENST00000264951 FOXD4L1Q9NU39 408 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 KIF20AO95235 890 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 STK38Q15208 465 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 C1orf141Q5JVX7 400 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 DAAM2Q86T65 1068 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 CCDC102AQ96A19 550 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 PRIMPOLQ96LW4 560 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 RBM28Q9NW13 759 aaKnown RBP6.43□□□□□ -1.38
XRN1-201ENST00000264951 FGFR1OPO95684 399 aaKnown RBP6.43□□□□□ -1.38
XRN1-201ENST00000264951 AMPHP49418 695 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 WASF1Q92558 559 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 ZNF428Q96B54 188 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 CCDC18Q5T9S5 1454 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 EPB41L2O43491 1005 aaKnown RBP6.43□□□□□ -1.38
XRN1-201ENST00000264951 GSDMDP57764 484 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 FAM114A2Q9NRY5 505 aa6.43□□□□□ -1.38
XRN1-201ENST00000264951 UQCRHLA0A096LP55 91 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 ANKRD62A6NC57 917 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 UQCRHP07919 91 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 SFPQP23246 707 aaKnown RBP eCLIP6.42□□□□□ -1.38
XRN1-201ENST00000264951 TTC5Q8N0Z6 440 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 GCC1Q96CN9 775 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 TIGD1Q96MW7 591 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 NUP155O75694 1391 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 DYNC1I1O14576 645 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 KRT32Q14532 448 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 PAF1Q8N7H5 531 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 CLUAP1Q96AJ1 413 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 EVC2Q86UK5 1308 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 TMCO5BA8MYB1 307 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 STMN4Q9H169 189 aaPredicted RBP6.42□□□□□ -1.38
XRN1-201ENST00000264951 NOL7Q9UMY1 257 aaKnown RBP6.42□□□□□ -1.38
XRN1-201ENST00000264951 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 KIF3CO14782 793 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 CTAGE5O15320 804 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 TAX1BP1Q86VP1 789 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 TTC14Q96N46 770 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 EID1Q9Y6B2 187 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 PYM1Q9BRP8 204 aaKnown RBP6.42□□□□□ -1.38
XRN1-201ENST00000264951 PPP6R1Q9UPN7 881 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 BAZ1AQ9NRL2 1556 aaPredicted RBP6.42□□□□□ -1.38
XRN1-201ENST00000264951 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 CCDC144AA2RUR9 1427 aa6.42□□□□□ -1.38
XRN1-201ENST00000264951 KIF5CO60282 957 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 NSRP1Q9H0G5 558 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 TNMDQ9H2S6 317 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 CCDC57Q2TAC2 916 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 GRPEL1Q9HAV7 217 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 PDE3AQ14432 1141 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 PAIP2Q9BPZ3 127 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 EFCAB2Q5VUJ9 269 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 FOXD4L5Q5VV16 416 aaPredicted RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 FOXD4L4Q8WXT5 416 aaPredicted RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 PHAXQ9H814 394 aaKnown RBP6.41□□□□□ -1.38
XRN1-201ENST00000264951 HSPA4P34932 840 aa6.41□□□□□ -1.38
XRN1-201ENST00000264951 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms