RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 TNNT2P45379 298 aaPredicted RBP32.01■■■□□ 2.72
EPCAM-201ENST00000263735 PMFBP1Q8TBY8 1022 aa32.01■■■□□ 2.72
EPCAM-201ENST00000263735 NGDNQ8NEJ9 315 aaKnown RBP32■■■□□ 2.71
EPCAM-201ENST00000263735 C19orf44Q9H6X5 657 aa32■■■□□ 2.71
EPCAM-201ENST00000263735 TTC21BQ7Z4L5 1316 aa32■■■□□ 2.71
EPCAM-201ENST00000263735 SCAF1Q9H7N4 1312 aaKnown RBP31.99■■■□□ 2.71
EPCAM-201ENST00000263735 PIK3C2AO00443 1686 aa31.99■■■□□ 2.71
EPCAM-201ENST00000263735 TTC21AQ8NDW8 1320 aa31.98■■■□□ 2.71
EPCAM-201ENST00000263735 BLMP54132 1417 aaPredicted RBP31.97■■■□□ 2.71
EPCAM-201ENST00000263735 NME9Q86XW9 330 aa31.97■■■□□ 2.71
EPCAM-201ENST00000263735 DMRT2Q9Y5R5 561 aa31.96■■■□□ 2.71
EPCAM-201ENST00000263735 PHF8Q9UPP1 1060 aa31.95■■■□□ 2.71
EPCAM-201ENST00000263735 MTHFSP49914 203 aa31.95■■■□□ 2.7
EPCAM-201ENST00000263735 WDR43Q15061 677 aaKnown RBP eCLIP31.95■■■□□ 2.7
EPCAM-201ENST00000263735 OVOS2A0A0J9YW53 1432 aa31.94■■■□□ 2.7
EPCAM-201ENST00000263735 OVOS2Q6IE36 1432 aa31.94■■■□□ 2.7
EPCAM-201ENST00000263735 MARF1Q9Y4F3 1742 aaKnown RBP31.94■■■□□ 2.7
EPCAM-201ENST00000263735 LRRC7Q96NW7 1537 aa31.94■■■□□ 2.7
EPCAM-201ENST00000263735 ZBED9Q6R2W3 1325 aa31.93■■■□□ 2.7
EPCAM-201ENST00000263735 COG3Q96JB2 828 aa31.93■■■□□ 2.7
EPCAM-201ENST00000263735 CFAP53Q96M91 514 aa31.92■■■□□ 2.7
EPCAM-201ENST00000263735 C1orf167Q5SNV9 1468 aa31.92■■■□□ 2.7
EPCAM-201ENST00000263735 AATKQ6ZMQ8 1374 aa31.9■■■□□ 2.7
EPCAM-201ENST00000263735 MST1RQ04912 1400 aa31.9■■■□□ 2.7
EPCAM-201ENST00000263735 ZNF335Q9H4Z2 1342 aaPredicted RBP31.89■■■□□ 2.7
EPCAM-201ENST00000263735 MSH6P52701 1360 aa31.89■■■□□ 2.7
EPCAM-201ENST00000263735 SMG6Q86US8 1419 aaKnown RBP31.89■■■□□ 2.7
EPCAM-201ENST00000263735 ESCO1Q5FWF5 840 aa31.89■■■□□ 2.69
EPCAM-201ENST00000263735 COL3A1P02461 1466 aaPredicted RBP31.88■■■□□ 2.69
EPCAM-201ENST00000263735 ATF3P18847 181 aa31.88■■■□□ 2.69
EPCAM-201ENST00000263735 ADAMTS8Q9UP79 889 aa31.87■■■□□ 2.69
EPCAM-201ENST00000263735 ZRANB1Q9UGI0 708 aa31.86■■■□□ 2.69
EPCAM-201ENST00000263735 USP31Q70CQ4 1352 aa31.86■■■□□ 2.69
EPCAM-201ENST00000263735 TRPM3Q9HCF6 1732 aaPredicted RBP31.86■■■□□ 2.69
EPCAM-201ENST00000263735 CADPS2Q86UW7 1296 aa31.84■■■□□ 2.69
EPCAM-201ENST00000263735 CDK12Q9NYV4 1490 aaPredicted RBP31.83■■■□□ 2.69
EPCAM-201ENST00000263735 PNPLA6Q8IY17 1366 aa31.83■■■□□ 2.69
EPCAM-201ENST00000263735 ORAI2Q96SN7 254 aa31.8■■■□□ 2.68
EPCAM-201ENST00000263735 POLKQ9UBT6 870 aa31.8■■■□□ 2.68
EPCAM-201ENST00000263735 PSME1Q06323 249 aa31.76■■■□□ 2.67
EPCAM-201ENST00000263735 ALS2Q96Q42 1657 aa31.75■■■□□ 2.67
EPCAM-201ENST00000263735 PEAK1Q9H792 1746 aa31.75■■■□□ 2.67
EPCAM-201ENST00000263735 LTN1O94822 1766 aa31.74■■■□□ 2.67
EPCAM-201ENST00000263735 NUDCQ9Y266 331 aa31.72■■■□□ 2.67
EPCAM-201ENST00000263735 PAK3O75914 559 aaPredicted RBP31.72■■■□□ 2.67
EPCAM-201ENST00000263735 FBLN1P23142 703 aa31.72■■■□□ 2.67
EPCAM-201ENST00000263735 EMILIN1Q9Y6C2 1016 aa31.72■■■□□ 2.67
EPCAM-201ENST00000263735 ABTB2Q8N961 1025 aa31.71■■■□□ 2.67
EPCAM-201ENST00000263735 FOXO3O43524 673 aa31.7■■■□□ 2.67
EPCAM-201ENST00000263735 NLRP6P59044 892 aa31.7■■■□□ 2.67
EPCAM-201ENST00000263735 DIAPH1O60610 1272 aaKnown RBP31.69■■■□□ 2.66
EPCAM-201ENST00000263735 RRS1Q15050 365 aaKnown RBP31.68■■■□□ 2.66
EPCAM-201ENST00000263735 PPM1GO15355 546 aaPredicted RBP31.67■■■□□ 2.66
EPCAM-201ENST00000263735 PHRF1Q9P1Y6 1649 aaKnown RBP31.65■■■□□ 2.66
EPCAM-201ENST00000263735 LTBP4Q8N2S1 1624 aa31.64■■■□□ 2.66
EPCAM-201ENST00000263735 KRT28Q7Z3Y7 464 aa31.63■■■□□ 2.65
EPCAM-201ENST00000263735 IQSEC2Q5JU85 1478 aa31.63■■■□□ 2.65
EPCAM-201ENST00000263735 U2AF1L5P0DN76 240 aaPredicted RBP31.63■■■□□ 2.65
EPCAM-201ENST00000263735 U2AF1Q01081 240 aaKnown RBP eCLIP31.63■■■□□ 2.65
EPCAM-201ENST00000263735 CCDC146Q8IYE0 955 aa31.63■■■□□ 2.65
EPCAM-201ENST00000263735 NFAT5O94916 1531 aa31.63■■■□□ 2.65
EPCAM-201ENST00000263735 NPHP3Q7Z494 1330 aa31.62■■■□□ 2.65
EPCAM-201ENST00000263735 SLIT3O75094 1523 aa31.62■■■□□ 2.65
EPCAM-201ENST00000263735 SENP3-EIF4A1A0A087X0R7 540 aa31.61■■■□□ 2.65
EPCAM-201ENST00000263735 RGPD1P0DJD0 1748 aa31.61■■■□□ 2.65
EPCAM-201ENST00000263735 KIF24Q5T7B8 1368 aa31.61■■■□□ 2.65
EPCAM-201ENST00000263735 NGEFQ8N5V2 710 aa31.61■■■□□ 2.65
EPCAM-201ENST00000263735 RUNDC1Q96C34 613 aa31.61■■■□□ 2.65
EPCAM-201ENST00000263735 SBNO1A3KN83 1393 aa31.6■■■□□ 2.65
EPCAM-201ENST00000263735 PXDNQ92626 1479 aa31.6■■■□□ 2.65
EPCAM-201ENST00000263735 U2SURPO15042 1029 aaKnown RBP31.6■■■□□ 2.65
EPCAM-201ENST00000263735 NUTM2GQ5VZR2 741 aa31.6■■■□□ 2.65
EPCAM-201ENST00000263735 NHSL1Q5SYE7 1610 aa31.59■■■□□ 2.65
EPCAM-201ENST00000263735 XPCQ01831 940 aaPredicted RBP31.58■■■□□ 2.65
EPCAM-201ENST00000263735 PDE3BQ13370 1112 aa31.58■■■□□ 2.65
EPCAM-201ENST00000263735 FLT4P35916 1363 aa31.58■■■□□ 2.65
EPCAM-201ENST00000263735 MAP3K19Q56UN5 1328 aa31.58■■■□□ 2.65
EPCAM-201ENST00000263735 CRYBG1Q9Y4K1 1723 aa31.57■■■□□ 2.64
EPCAM-201ENST00000263735 SOX12O15370 315 aa31.56■■■□□ 2.64
EPCAM-201ENST00000263735 IL13P35225 146 aa31.56■■■□□ 2.64
EPCAM-201ENST00000263735 SLAIN2Q9P270 581 aa31.56■■■□□ 2.64
EPCAM-201ENST00000263735 SALL2Q9Y467 1007 aaPredicted RBP31.56■■■□□ 2.64
EPCAM-201ENST00000263735 APAF1O14727 1248 aa31.55■■■□□ 2.64
EPCAM-201ENST00000263735 BRINP3Q76B58 766 aa31.55■■■□□ 2.64
EPCAM-201ENST00000263735 KCNH5Q8NCM2 988 aa31.54■■■□□ 2.64
EPCAM-201ENST00000263735 PNNQ9H307 717 aaKnown RBP31.54■■■□□ 2.64
EPCAM-201ENST00000263735 RTL1A6NKG5 1358 aa31.53■■■□□ 2.64
EPCAM-201ENST00000263735 TNS3Q68CZ2 1445 aa31.53■■■□□ 2.64
EPCAM-201ENST00000263735 USP19O94966 1318 aa31.52■■■□□ 2.64
EPCAM-201ENST00000263735 ZNF521Q96K83 1311 aa31.51■■■□□ 2.63
EPCAM-201ENST00000263735 FCHSD2O94868 740 aa31.5■■■□□ 2.63
EPCAM-201ENST00000263735 MED1Q15648 1581 aaPredicted RBP31.5■■■□□ 2.63
EPCAM-201ENST00000263735 PLEKHF1Q96S99 279 aa31.49■■■□□ 2.63
EPCAM-201ENST00000263735 AMPHP49418 695 aa31.49■■■□□ 2.63
EPCAM-201ENST00000263735 NCBP3Q53F19 620 aaKnown RBP31.49■■■□□ 2.63
EPCAM-201ENST00000263735 EIF4A2Q14240 407 aaKnown RBP31.48■■■□□ 2.63
EPCAM-201ENST00000263735 TCP11L2Q8N4U5 519 aa31.48■■■□□ 2.63
EPCAM-201ENST00000263735 DLG5Q8TDM6 1919 aa31.48■■■□□ 2.63
EPCAM-201ENST00000263735 HSP90AB2PQ58FF8 381 aa31.47■■■□□ 2.63
EPCAM-201ENST00000263735 DDX17Q92841 729 aaKnown RBP31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms