RNA–Protein interactions for RNA: ENST00000263726.3

LHX4-201, Transcript of LIM homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX4, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-201ENST00000263726 HOMER1Q86YM7 354 aa13.44□□□□□ -0.26
LHX4-201ENST00000263726 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
LHX4-201ENST00000263726 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
LHX4-201ENST00000263726 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 INSRP06213 1382 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 CCDC192P0DO97 292 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
LHX4-201ENST00000263726 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 ZKSCAN5Q9Y2L8 839 aa13.43□□□□□ -0.26
LHX4-201ENST00000263726 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
LHX4-201ENST00000263726 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
LHX4-201ENST00000263726 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 LRSAM1Q6UWE0 723 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 FIBPO43427 364 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 HDAC1Q13547 482 aaPredicted RBP13.42□□□□□ -0.26
LHX4-201ENST00000263726 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
LHX4-201ENST00000263726 CWC15Q9P013 229 aaKnown RBP13.42□□□□□ -0.26
LHX4-201ENST00000263726 RBM27Q9P2N5 1060 aaKnown RBP13.42□□□□□ -0.26
LHX4-201ENST00000263726 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
LHX4-201ENST00000263726 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
LHX4-201ENST00000263726 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
LHX4-201ENST00000263726 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
LHX4-201ENST00000263726 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
LHX4-201ENST00000263726 ARHGAP5Q13017 1502 aa13.4□□□□□ -0.26
LHX4-201ENST00000263726 TERF1P54274 439 aa13.4□□□□□ -0.26
LHX4-201ENST00000263726 TBC1D9Q6ZT07 1266 aa13.4□□□□□ -0.26
LHX4-201ENST00000263726 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
LHX4-201ENST00000263726 GTPBP4Q9BZE4 634 aaKnown RBP13.4□□□□□ -0.27
LHX4-201ENST00000263726 NSD3Q9BZ95 1437 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 TRIM27P14373 513 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 TWISTNBQ3B726 338 aaPredicted RBP13.39□□□□□ -0.27
LHX4-201ENST00000263726 CCDC183Q5T5S1 534 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 PTPRGP23470 1445 aa13.39□□□□□ -0.27
LHX4-201ENST00000263726 HMOX1P09601 288 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
LHX4-201ENST00000263726 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 NUCB1Q02818 461 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
LHX4-201ENST00000263726 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
LHX4-201ENST00000263726 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 USP25Q9UHP3 1055 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 NOL7Q9UMY1 257 aaKnown RBP13.37□□□□□ -0.27
LHX4-201ENST00000263726 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
LHX4-201ENST00000263726 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
LHX4-201ENST00000263726 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
LHX4-201ENST00000263726 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
LHX4-201ENST00000263726 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
LHX4-201ENST00000263726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
LHX4-201ENST00000263726 COG3Q96JB2 828 aa13.36□□□□□ -0.27
LHX4-201ENST00000263726 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
LHX4-201ENST00000263726 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
LHX4-201ENST00000263726 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
LHX4-201ENST00000263726 ADCY5O95622 1261 aa13.35□□□□□ -0.27
LHX4-201ENST00000263726 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
LHX4-201ENST00000263726 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
LHX4-201ENST00000263726 TNMDQ9H2S6 317 aa13.35□□□□□ -0.27
LHX4-201ENST00000263726 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
LHX4-201ENST00000263726 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
LHX4-201ENST00000263726 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
LHX4-201ENST00000263726 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
LHX4-201ENST00000263726 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
LHX4-201ENST00000263726 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 PIK3C2GO75747 1445 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
LHX4-201ENST00000263726 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 NPHP1O15259 732 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 CCP110O43303 1012 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 PZPP20742 1482 aa13.34□□□□□ -0.27
LHX4-201ENST00000263726 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.27
LHX4-201ENST00000263726 ABCC11Q96J66 1382 aa13.33□□□□□ -0.28
LHX4-201ENST00000263726 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.28
LHX4-201ENST00000263726 GAS2L2Q8NHY3 880 aa13.33□□□□□ -0.28
LHX4-201ENST00000263726 TSPYL1Q9H0U9 437 aa13.33□□□□□ -0.28
LHX4-201ENST00000263726 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
LHX4-201ENST00000263726 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
LHX4-201ENST00000263726 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
LHX4-201ENST00000263726 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 PSMA5P28066 241 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
LHX4-201ENST00000263726 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 RLBP1P12271 317 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 PDCP20941 246 aa13.32□□□□□ -0.28
LHX4-201ENST00000263726 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms