RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ERC1Q8IUD2 1116 aa20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 PIP4K2AP48426 406 aaPredicted RBP20.84■□□□□ 0.93
NOTCH3-201ENST00000263388 MSH5O43196 834 aa20.84■□□□□ 0.93
NOTCH3-201ENST00000263388 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
NOTCH3-201ENST00000263388 SMC2O95347 1197 aa20.84■□□□□ 0.93
NOTCH3-201ENST00000263388 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.93
NOTCH3-201ENST00000263388 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.92
NOTCH3-201ENST00000263388 JMYQ8N9B5 988 aa20.83■□□□□ 0.92
NOTCH3-201ENST00000263388 ANKRD1Q15327 319 aa20.83■□□□□ 0.92
NOTCH3-201ENST00000263388 LUC7LQ9NQ29 371 aaKnown RBP20.82■□□□□ 0.92
NOTCH3-201ENST00000263388 ANKRD50Q9ULJ7 1429 aa20.82■□□□□ 0.92
NOTCH3-201ENST00000263388 ZFYVE27Q5T4F4 411 aa20.82■□□□□ 0.92
NOTCH3-201ENST00000263388 GOLGA6L7A0A1B0GV03 622 aa20.82■□□□□ 0.92
NOTCH3-201ENST00000263388 CCDC27Q2M243 656 aa20.82■□□□□ 0.92
NOTCH3-201ENST00000263388 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
NOTCH3-201ENST00000263388 TXLNBQ8N3L3 684 aa20.81■□□□□ 0.92
NOTCH3-201ENST00000263388 GCC1Q96CN9 775 aa20.81■□□□□ 0.92
NOTCH3-201ENST00000263388 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
NOTCH3-201ENST00000263388 ERLIN2O94905 339 aa20.8■□□□□ 0.92
NOTCH3-201ENST00000263388 CDK5RAP3Q96JB5 506 aa20.8■□□□□ 0.92
NOTCH3-201ENST00000263388 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
NOTCH3-201ENST00000263388 GOLGA6L10A6NI86 522 aa20.8■□□□□ 0.92
NOTCH3-201ENST00000263388 CCDC192P0DO97 292 aa20.8■□□□□ 0.92
NOTCH3-201ENST00000263388 CASKIN1Q8WXD9 1431 aa20.79■□□□□ 0.92
NOTCH3-201ENST00000263388 RNF214Q8ND24 703 aa20.79■□□□□ 0.92
NOTCH3-201ENST00000263388 ZNHIT6Q9NWK9 470 aaKnown RBP20.79■□□□□ 0.92
NOTCH3-201ENST00000263388 NEK4P51957 841 aa20.79■□□□□ 0.92
NOTCH3-201ENST00000263388 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
NOTCH3-201ENST00000263388 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
NOTCH3-201ENST00000263388 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
NOTCH3-201ENST00000263388 GNAI2P04899 355 aa20.78■□□□□ 0.92
NOTCH3-201ENST00000263388 TTLL5Q6EMB2 1281 aa20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 AIMP1Q12904 312 aaKnown RBP20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 SYCP1Q15431 976 aa20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 KIF6Q6ZMV9 814 aa20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 AEBP1Q8IUX7 1158 aa20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 CCAR1Q8IX12 1150 aaKnown RBP20.77■□□□□ 0.92
NOTCH3-201ENST00000263388 CT47B1P0C2W7 299 aaPredicted RBP20.76■□□□□ 0.91
NOTCH3-201ENST00000263388 STIM1Q13586 685 aa20.76■□□□□ 0.91
NOTCH3-201ENST00000263388 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
NOTCH3-201ENST00000263388 ATF3P18847 181 aa20.76■□□□□ 0.91
NOTCH3-201ENST00000263388 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
NOTCH3-201ENST00000263388 FYB1O15117 783 aa20.75■□□□□ 0.91
NOTCH3-201ENST00000263388 MTHFSP49914 203 aa20.74■□□□□ 0.91
NOTCH3-201ENST00000263388 KIAA0754O94854 1291 aa20.74■□□□□ 0.91
NOTCH3-201ENST00000263388 PDIA4P13667 645 aaKnown RBP20.74■□□□□ 0.91
NOTCH3-201ENST00000263388 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.74■□□□□ 0.91
NOTCH3-201ENST00000263388 PRPF40AO75400 957 aaKnown RBP20.74■□□□□ 0.91
NOTCH3-201ENST00000263388 WDR33Q9C0J8 1336 aaKnown RBP20.73■□□□□ 0.91
NOTCH3-201ENST00000263388 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
NOTCH3-201ENST00000263388 ADAMTS8Q9UP79 889 aa20.73■□□□□ 0.91
NOTCH3-201ENST00000263388 AXDND1Q5T1B0 1012 aaPredicted RBP20.73■□□□□ 0.91
NOTCH3-201ENST00000263388 IKQ13123 557 aaPredicted RBP20.72■□□□□ 0.91
NOTCH3-201ENST00000263388 SRCIN1Q9C0H9 1055 aa20.72■□□□□ 0.91
NOTCH3-201ENST00000263388 IQCEQ6IPM2 695 aa20.72■□□□□ 0.91
NOTCH3-201ENST00000263388 TSPYL1Q9H0U9 437 aa20.72■□□□□ 0.91
NOTCH3-201ENST00000263388 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 FIBPO43427 364 aa20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 WWC2Q6AWC2 1192 aa20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 TNMDQ9H2S6 317 aa20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 STK38Q15208 465 aa20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
NOTCH3-201ENST00000263388 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 SERPINC1P01008 464 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 USP8P40818 1118 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 EIF3JO75822 258 aaKnown RBP20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 TAF3Q5VWG9 929 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 PPFIBP1Q86W92 1011 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 TRIM22Q8IYM9 498 aa20.7■□□□□ 0.9
NOTCH3-201ENST00000263388 HSP90AB3PQ58FF7 597 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 SPC24Q8NBT2 197 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 KRT85P78386 507 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 FMNL2Q96PY5 1086 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 GNL3LQ9NVN8 582 aaKnown RBP20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 BCL11BQ9C0K0 894 aaPredicted RBP20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 SEPT7Q16181 437 aaKnown RBP20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 TCP11L2Q8N4U5 519 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 CFAP45Q9UL16 551 aa20.69■□□□□ 0.9
NOTCH3-201ENST00000263388 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
NOTCH3-201ENST00000263388 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
NOTCH3-201ENST00000263388 LRRCC1Q9C099 1032 aa20.68■□□□□ 0.9
NOTCH3-201ENST00000263388 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
NOTCH3-201ENST00000263388 K7ELQ4 463 aaPredicted RBP20.68■□□□□ 0.9
NOTCH3-201ENST00000263388 CBFA2T2O43439 604 aa20.67■□□□□ 0.9
NOTCH3-201ENST00000263388 PLCD4Q9BRC7 762 aa20.67■□□□□ 0.9
NOTCH3-201ENST00000263388 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
NOTCH3-201ENST00000263388 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
NOTCH3-201ENST00000263388 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
NOTCH3-201ENST00000263388 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 ME1P48163 572 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 DYDC1Q8WWB3 177 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 GGNBP2Q9H3C7 697 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 ERLIN1O75477 346 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 CDKL5O76039 1030 aa20.66■□□□□ 0.9
NOTCH3-201ENST00000263388 KRT18P05783 430 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms